Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2539 and DvMF_2540 are separated by 56 nucleotides DvMF_2540 and DvMF_2541 are separated by 134 nucleotides
DvMF_2539: DvMF_2539 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,207,324 to 3,209,369
_2539
DvMF_2540: DvMF_2540 - response regulator receiver protein (RefSeq), at 3,209,426 to 3,209,878
_2540
DvMF_2541: DvMF_2541 - multi-sensor signal transduction histidine kinase (RefSeq), at 3,210,013 to 3,212,637
_2541
Position (kb)
3209
3210 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3208.552 kb on + strand, within DvMF_2539 at 3208.552 kb on + strand, within DvMF_2539 at 3208.560 kb on - strand, within DvMF_2539 at 3208.570 kb on + strand, within DvMF_2539 at 3208.730 kb on - strand, within DvMF_2539 at 3208.758 kb on + strand, within DvMF_2539 at 3208.795 kb on + strand, within DvMF_2539 at 3209.205 kb on - strand at 3209.256 kb on + strand at 3209.267 kb on + strand at 3209.267 kb on + strand at 3209.334 kb on - strand at 3209.334 kb on - strand at 3209.406 kb on + strand at 3209.443 kb on + strand at 3209.685 kb on + strand, within DvMF_2540 at 3209.754 kb on + strand, within DvMF_2540 at 3209.754 kb on + strand, within DvMF_2540 at 3209.762 kb on - strand, within DvMF_2540 at 3210.100 kb on - strand at 3210.140 kb on + strand at 3210.227 kb on + strand at 3210.316 kb on + strand, within DvMF_2541 at 3210.425 kb on - strand, within DvMF_2541 at 3210.602 kb on + strand, within DvMF_2541 at 3210.645 kb on + strand, within DvMF_2541 at 3210.743 kb on + strand, within DvMF_2541
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 3,208,552 + DvMF_2539 0.60 -0.5 3,208,552 + DvMF_2539 0.60 -4.3 3,208,560 - DvMF_2539 0.60 -4.6 3,208,570 + DvMF_2539 0.61 -1.1 3,208,730 - DvMF_2539 0.69 -1.7 3,208,758 + DvMF_2539 0.70 -1.7 3,208,795 + DvMF_2539 0.72 -1.6 3,209,205 - -4.5 3,209,256 + -0.9 3,209,267 + -2.2 3,209,267 + -2.8 3,209,334 - -0.4 3,209,334 - -0.4 3,209,406 + -4.2 3,209,443 + -0.6 3,209,685 + DvMF_2540 0.57 -1.1 3,209,754 + DvMF_2540 0.72 -0.9 3,209,754 + DvMF_2540 0.72 -2.2 3,209,762 - DvMF_2540 0.74 -1.0 3,210,100 - -1.8 3,210,140 + +0.9 3,210,227 + -1.1 3,210,316 + DvMF_2541 0.12 -0.0 3,210,425 - DvMF_2541 0.16 -1.1 3,210,602 + DvMF_2541 0.22 -0.6 3,210,645 + DvMF_2541 0.24 +0.7 3,210,743 + DvMF_2541 0.28 -0.6
Or see this region's nucleotide sequence