Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2525 and DvMF_2526 are separated by 12 nucleotides DvMF_2526 and DvMF_2527 overlap by 25 nucleotides DvMF_2527 and DvMF_2528 are separated by 166 nucleotides DvMF_2528 and DvMF_2529 are separated by 331 nucleotides
DvMF_2525: DvMF_2525 - flagellar hook-associated protein 3 (RefSeq), at 3,184,345 to 3,185,868
_2525
DvMF_2526: DvMF_2526 - carbon storage regulator, CsrA (RefSeq), at 3,185,881 to 3,186,120
_2526
DvMF_2527: DvMF_2527 - flagellar assembly protein FliW (RefSeq), at 3,186,096 to 3,186,647
_2527
DvMF_2528: DvMF_2528 - transcriptional regulator, NifA subfamily, Fis Family (RefSeq), at 3,186,814 to 3,188,553
_2528
DvMF_2529: DvMF_2529 - MscS Mechanosensitive ion channel (RefSeq), at 3,188,885 to 3,191,479
_2529
Position (kb)
3186
3187
3188
3189 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3185.967 kb on + strand, within DvMF_2526 at 3186.155 kb on + strand, within DvMF_2527 at 3186.327 kb on - strand, within DvMF_2527 at 3186.818 kb on - strand at 3186.848 kb on + strand at 3186.922 kb on + strand at 3186.922 kb on + strand at 3186.924 kb on + strand at 3186.930 kb on - strand at 3186.984 kb on + strand at 3186.984 kb on + strand at 3186.986 kb on + strand at 3186.992 kb on - strand, within DvMF_2528 at 3186.994 kb on - strand, within DvMF_2528 at 3186.994 kb on - strand, within DvMF_2528 at 3187.085 kb on + strand, within DvMF_2528 at 3187.171 kb on - strand, within DvMF_2528 at 3187.370 kb on - strand, within DvMF_2528 at 3187.617 kb on - strand, within DvMF_2528 at 3187.890 kb on + strand, within DvMF_2528 at 3187.901 kb on - strand, within DvMF_2528 at 3188.281 kb on - strand, within DvMF_2528 at 3188.462 kb on + strand at 3188.526 kb on + strand at 3188.742 kb on + strand at 3188.742 kb on + strand at 3188.748 kb on - strand at 3188.750 kb on - strand at 3188.969 kb on + strand at 3189.128 kb on - strand at 3189.242 kb on - strand, within DvMF_2529
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 3,185,967 + DvMF_2526 0.36 -0.3 3,186,155 + DvMF_2527 0.11 +0.3 3,186,327 - DvMF_2527 0.42 -0.3 3,186,818 - -1.0 3,186,848 + -0.9 3,186,922 + -0.0 3,186,922 + -0.9 3,186,924 + -1.4 3,186,930 - -0.2 3,186,984 + -0.5 3,186,984 + +0.9 3,186,986 + -0.8 3,186,992 - DvMF_2528 0.10 -1.6 3,186,994 - DvMF_2528 0.10 +0.2 3,186,994 - DvMF_2528 0.10 -0.9 3,187,085 + DvMF_2528 0.16 -1.2 3,187,171 - DvMF_2528 0.21 -0.2 3,187,370 - DvMF_2528 0.32 -1.1 3,187,617 - DvMF_2528 0.46 -0.4 3,187,890 + DvMF_2528 0.62 -1.3 3,187,901 - DvMF_2528 0.62 -0.4 3,188,281 - DvMF_2528 0.84 -1.5 3,188,462 + -3.0 3,188,526 + -0.5 3,188,742 + +0.5 3,188,742 + +0.0 3,188,748 - -1.0 3,188,750 - -0.9 3,188,969 + -1.5 3,189,128 - -1.0 3,189,242 - DvMF_2529 0.14 -0.3
Or see this region's nucleotide sequence