Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1933 and DvMF_1934 are separated by 153 nucleotides DvMF_1934 and DvMF_1935 are separated by 413 nucleotides
DvMF_1933: DvMF_1933 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 2,384,612 to 2,386,036
_1933
DvMF_1934: DvMF_1934 - sulfoacetaldehyde acetyltransferase (RefSeq), at 2,386,190 to 2,387,932
_1934
DvMF_1935: DvMF_1935 - hypothetical protein (RefSeq), at 2,388,346 to 2,388,756
_1935
Position (kb)
2386
2387
2388 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2385.597 kb on + strand, within DvMF_1933 at 2385.662 kb on + strand, within DvMF_1933 at 2385.670 kb on - strand, within DvMF_1933 at 2385.809 kb on + strand, within DvMF_1933 at 2385.927 kb on - strand at 2385.981 kb on - strand at 2386.043 kb on - strand at 2386.078 kb on + strand at 2386.312 kb on - strand at 2386.798 kb on - strand, within DvMF_1934 at 2386.798 kb on - strand, within DvMF_1934 at 2387.049 kb on - strand, within DvMF_1934 at 2387.142 kb on - strand, within DvMF_1934 at 2387.583 kb on - strand, within DvMF_1934 at 2387.593 kb on + strand, within DvMF_1934 at 2387.601 kb on - strand, within DvMF_1934 at 2387.711 kb on + strand, within DvMF_1934 at 2388.140 kb on + strand at 2388.318 kb on + strand at 2388.505 kb on + strand, within DvMF_1935 at 2388.550 kb on + strand, within DvMF_1935 at 2388.628 kb on + strand, within DvMF_1935 at 2388.714 kb on + strand, within DvMF_1935 at 2388.746 kb on - strand at 2388.759 kb on - strand at 2388.759 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 2,385,597 + DvMF_1933 0.69 -1.0 2,385,662 + DvMF_1933 0.74 -0.1 2,385,670 - DvMF_1933 0.74 -0.4 2,385,809 + DvMF_1933 0.84 -0.3 2,385,927 - -0.7 2,385,981 - -0.5 2,386,043 - -0.8 2,386,078 + -0.8 2,386,312 - -1.0 2,386,798 - DvMF_1934 0.35 -0.3 2,386,798 - DvMF_1934 0.35 -0.6 2,387,049 - DvMF_1934 0.49 +0.3 2,387,142 - DvMF_1934 0.55 -0.7 2,387,583 - DvMF_1934 0.80 +0.3 2,387,593 + DvMF_1934 0.80 -3.9 2,387,601 - DvMF_1934 0.81 +0.6 2,387,711 + DvMF_1934 0.87 -1.4 2,388,140 + +0.1 2,388,318 + -0.4 2,388,505 + DvMF_1935 0.39 +1.0 2,388,550 + DvMF_1935 0.50 -0.1 2,388,628 + DvMF_1935 0.69 -0.4 2,388,714 + DvMF_1935 0.90 -1.1 2,388,746 - -0.2 2,388,759 - -0.5 2,388,759 - -0.5
Or see this region's nucleotide sequence