Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1618 and DvMF_1619 are separated by 217 nucleotides DvMF_1619 and DvMF_1620 are separated by 35 nucleotides
DvMF_1618: DvMF_1618 - protein of unknown function DUF1078 domain protein (RefSeq), at 1,992,579 to 1,994,156
_1618
DvMF_1619: DvMF_1619 - flagellar hook-associated protein FlgK (RefSeq), at 1,994,374 to 1,996,446
_1619
DvMF_1620: DvMF_1620 - flagellar hook-associated protein 3 (RefSeq), at 1,996,482 to 1,997,975
_1620
Position (kb)
1994
1995
1996
1997 Strain fitness (log2 ratio)
-1
0
1 at 1993.574 kb on + strand, within DvMF_1618 at 1993.687 kb on - strand, within DvMF_1618 at 1993.693 kb on + strand, within DvMF_1618 at 1993.774 kb on + strand, within DvMF_1618 at 1993.829 kb on + strand, within DvMF_1618 at 1994.102 kb on + strand at 1994.103 kb on + strand at 1994.212 kb on + strand at 1994.450 kb on + strand at 1994.450 kb on + strand at 1994.649 kb on - strand, within DvMF_1619 at 1994.788 kb on - strand, within DvMF_1619 at 1994.938 kb on - strand, within DvMF_1619 at 1995.343 kb on - strand, within DvMF_1619 at 1995.454 kb on - strand, within DvMF_1619 at 1995.496 kb on - strand, within DvMF_1619 at 1995.567 kb on - strand, within DvMF_1619 at 1995.641 kb on - strand, within DvMF_1619 at 1995.756 kb on + strand, within DvMF_1619 at 1995.781 kb on + strand, within DvMF_1619 at 1995.971 kb on + strand, within DvMF_1619 at 1995.979 kb on - strand, within DvMF_1619 at 1996.119 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.155 kb on + strand, within DvMF_1619 at 1996.163 kb on - strand, within DvMF_1619 at 1996.403 kb on - strand at 1996.618 kb on - strand at 1996.623 kb on - strand at 1996.623 kb on - strand at 1996.626 kb on + strand at 1996.724 kb on - strand, within DvMF_1620 at 1996.815 kb on + strand, within DvMF_1620 at 1996.880 kb on - strand, within DvMF_1620 at 1996.923 kb on + strand, within DvMF_1620 at 1996.958 kb on - strand, within DvMF_1620 at 1996.970 kb on - strand, within DvMF_1620 at 1997.132 kb on - strand, within DvMF_1620 at 1997.137 kb on - strand, within DvMF_1620 at 1997.140 kb on + strand, within DvMF_1620 at 1997.287 kb on - strand, within DvMF_1620
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 1,993,574 + DvMF_1618 0.63 -0.8 1,993,687 - DvMF_1618 0.70 -0.3 1,993,693 + DvMF_1618 0.71 -0.4 1,993,774 + DvMF_1618 0.76 -0.8 1,993,829 + DvMF_1618 0.79 -0.6 1,994,102 + -0.8 1,994,103 + -1.6 1,994,212 + -1.0 1,994,450 + -0.9 1,994,450 + -0.0 1,994,649 - DvMF_1619 0.13 +0.3 1,994,788 - DvMF_1619 0.20 -0.5 1,994,938 - DvMF_1619 0.27 -0.5 1,995,343 - DvMF_1619 0.47 -0.8 1,995,454 - DvMF_1619 0.52 -0.6 1,995,496 - DvMF_1619 0.54 -0.2 1,995,567 - DvMF_1619 0.58 -0.9 1,995,641 - DvMF_1619 0.61 -0.1 1,995,756 + DvMF_1619 0.67 -1.1 1,995,781 + DvMF_1619 0.68 -0.6 1,995,971 + DvMF_1619 0.77 -0.3 1,995,979 - DvMF_1619 0.77 -1.7 1,996,119 + DvMF_1619 0.84 -0.6 1,996,155 + DvMF_1619 0.86 -0.9 1,996,155 + DvMF_1619 0.86 -0.4 1,996,155 + DvMF_1619 0.86 -1.3 1,996,163 - DvMF_1619 0.86 -0.4 1,996,403 - +0.1 1,996,618 - -0.3 1,996,623 - +0.3 1,996,623 - -1.3 1,996,626 + +0.6 1,996,724 - DvMF_1620 0.16 -0.7 1,996,815 + DvMF_1620 0.22 +0.1 1,996,880 - DvMF_1620 0.27 -0.6 1,996,923 + DvMF_1620 0.30 -0.7 1,996,958 - DvMF_1620 0.32 -0.9 1,996,970 - DvMF_1620 0.33 +0.2 1,997,132 - DvMF_1620 0.44 -0.5 1,997,137 - DvMF_1620 0.44 +0.7 1,997,140 + DvMF_1620 0.44 +0.6 1,997,287 - DvMF_1620 0.54 +0.9
Or see this region's nucleotide sequence