Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1434
Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,754,888 | - | DvMF_1433 | 0.55 | -0.0 | |
1,755,035 | - | DvMF_1433 | 0.66 | -0.7 | |
1,755,256 | - | DvMF_1433 | 0.83 | -0.6 | |
1,755,383 | - | -1.3 | |||
1,755,419 | - | -0.5 | |||
1,755,440 | + | -0.1 | |||
1,755,686 | - | -1.5 | |||
1,755,826 | + | -1.4 | |||
1,755,855 | + | -1.8 | |||
1,756,052 | + | DvMF_1434 | 0.16 | -2.0 | |
1,756,052 | + | DvMF_1434 | 0.16 | -0.0 | |
1,756,070 | - | DvMF_1434 | 0.17 | -0.8 | |
1,756,097 | - | DvMF_1434 | 0.19 | +0.2 | |
1,756,181 | - | DvMF_1434 | 0.25 | -0.9 | |
1,756,521 | - | DvMF_1434 | 0.47 | -0.6 | |
1,756,571 | + | DvMF_1434 | 0.51 | -0.1 | |
1,756,865 | + | DvMF_1434 | 0.70 | -0.3 | |
1,756,909 | - | DvMF_1434 | 0.73 | -1.7 | |
1,756,909 | - | DvMF_1434 | 0.73 | -1.4 | |
1,756,990 | + | DvMF_1434 | 0.79 | +0.3 | |
1,756,998 | - | DvMF_1434 | 0.79 | -0.6 | |
1,757,068 | + | DvMF_1434 | 0.84 | -0.7 | |
1,757,068 | + | DvMF_1434 | 0.84 | -2.0 | |
1,757,317 | + | +0.5 | |||
1,757,567 | - | -0.1 | |||
1,757,605 | + | +0.9 | |||
1,757,630 | - | +0.8 | |||
1,757,834 | - | DvMF_1435 | 0.54 | -1.2 | |
1,757,894 | + | DvMF_1435 | 0.67 | -0.0 | |
1,758,077 | - | +0.1 | |||
1,758,077 | - | -0.4 | |||
1,758,160 | + | -0.6 | |||
1,758,243 | + | -1.3 | |||
1,758,274 | - | -0.6 |
Or see this region's nucleotide sequence