Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0823 and DvMF_0824 are separated by 7 nucleotides DvMF_0824 and DvMF_0825 are separated by 293 nucleotides DvMF_0825 and DvMF_0826 are separated by 467 nucleotides
DvMF_0823: DvMF_0823 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 993,314 to 994,684
_0823
DvMF_0824: DvMF_0824 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 994,692 to 996,542
_0824
DvMF_0825: DvMF_0825 - hypothetical protein (RefSeq), at 996,836 to 997,072
_0825
DvMF_0826: DvMF_0826 - cytochrome c assembly protein (RefSeq), at 997,540 to 999,438
_0826
Position (kb) 994
995
996
997 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 993.900 kb on - strand, within DvMF_0823 at 993.983 kb on - strand, within DvMF_0823 at 993.983 kb on - strand, within DvMF_0823 at 994.069 kb on - strand, within DvMF_0823 at 994.376 kb on + strand, within DvMF_0823 at 994.392 kb on - strand, within DvMF_0823 at 994.511 kb on - strand, within DvMF_0823 at 994.545 kb on - strand, within DvMF_0823 at 994.687 kb on - strand at 995.084 kb on + strand, within DvMF_0824 at 995.305 kb on + strand, within DvMF_0824 at 995.313 kb on - strand, within DvMF_0824 at 995.560 kb on - strand, within DvMF_0824 at 995.867 kb on + strand, within DvMF_0824 at 995.912 kb on + strand, within DvMF_0824 at 996.001 kb on - strand, within DvMF_0824 at 996.011 kb on - strand, within DvMF_0824 at 996.131 kb on - strand, within DvMF_0824 at 996.150 kb on - strand, within DvMF_0824 at 996.197 kb on + strand, within DvMF_0824 at 996.205 kb on - strand, within DvMF_0824 at 996.305 kb on - strand, within DvMF_0824 at 996.366 kb on - strand at 996.366 kb on - strand at 996.427 kb on - strand at 996.429 kb on - strand at 996.749 kb on + strand at 997.090 kb on + strand at 997.204 kb on - strand at 997.224 kb on - strand at 997.229 kb on - strand at 997.312 kb on + strand at 997.335 kb on - strand at 997.379 kb on + strand at 997.527 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 993,900 - DvMF_0823 0.43 -1.2 993,983 - DvMF_0823 0.49 -0.3 993,983 - DvMF_0823 0.49 -0.9 994,069 - DvMF_0823 0.55 -0.3 994,376 + DvMF_0823 0.77 +0.1 994,392 - DvMF_0823 0.79 -1.1 994,511 - DvMF_0823 0.87 +0.3 994,545 - DvMF_0823 0.90 -1.1 994,687 - -0.3 995,084 + DvMF_0824 0.21 -0.2 995,305 + DvMF_0824 0.33 +0.0 995,313 - DvMF_0824 0.34 -0.3 995,560 - DvMF_0824 0.47 -2.1 995,867 + DvMF_0824 0.63 -3.9 995,912 + DvMF_0824 0.66 -0.3 996,001 - DvMF_0824 0.71 -0.7 996,011 - DvMF_0824 0.71 -1.9 996,131 - DvMF_0824 0.78 -0.6 996,150 - DvMF_0824 0.79 -1.0 996,197 + DvMF_0824 0.81 +1.1 996,205 - DvMF_0824 0.82 -0.6 996,305 - DvMF_0824 0.87 -1.0 996,366 - -1.0 996,366 - +1.3 996,427 - -1.1 996,429 - -0.6 996,749 + +0.2 997,090 + -2.5 997,204 - -0.3 997,224 - -0.0 997,229 - +0.6 997,312 + -0.9 997,335 - +0.3 997,379 + +0.2 997,527 - -1.5
Or see this region's nucleotide sequence