Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0802 and DvMF_0803 are separated by 3 nucleotides DvMF_0803 and DvMF_0804 are separated by 318 nucleotides
DvMF_0802: DvMF_0802 - ABC transporter related (RefSeq), at 966,101 to 967,405
_0802
DvMF_0803: DvMF_0803 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 967,409 to 969,139
_0803
DvMF_0804: DvMF_0804 - UspA domain protein (RefSeq), at 969,458 to 969,874
_0804
Position (kb) 967
968
969
970 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 966.561 kb on - strand, within DvMF_0802 at 966.786 kb on + strand, within DvMF_0802 at 966.810 kb on - strand, within DvMF_0802 at 967.030 kb on + strand, within DvMF_0802 at 967.030 kb on + strand, within DvMF_0802 at 967.038 kb on - strand, within DvMF_0802 at 967.048 kb on + strand, within DvMF_0802 at 967.056 kb on - strand, within DvMF_0802 at 967.139 kb on - strand, within DvMF_0802 at 967.156 kb on - strand, within DvMF_0802 at 967.181 kb on - strand, within DvMF_0802 at 967.205 kb on - strand, within DvMF_0802 at 967.210 kb on - strand, within DvMF_0802 at 967.343 kb on - strand at 967.377 kb on - strand at 967.681 kb on + strand, within DvMF_0803 at 967.694 kb on + strand, within DvMF_0803 at 967.735 kb on + strand, within DvMF_0803 at 967.735 kb on + strand, within DvMF_0803 at 967.743 kb on - strand, within DvMF_0803 at 967.868 kb on - strand, within DvMF_0803 at 967.917 kb on + strand, within DvMF_0803 at 967.933 kb on - strand, within DvMF_0803 at 967.982 kb on - strand, within DvMF_0803 at 968.119 kb on - strand, within DvMF_0803 at 968.164 kb on + strand, within DvMF_0803 at 968.251 kb on - strand, within DvMF_0803 at 968.360 kb on - strand, within DvMF_0803 at 968.379 kb on + strand, within DvMF_0803 at 968.444 kb on - strand, within DvMF_0803 at 968.461 kb on + strand, within DvMF_0803 at 968.594 kb on + strand, within DvMF_0803 at 968.768 kb on - strand, within DvMF_0803 at 968.985 kb on - strand at 969.350 kb on - strand at 969.423 kb on + strand at 969.544 kb on + strand, within DvMF_0804 at 969.651 kb on + strand, within DvMF_0804 at 969.651 kb on + strand, within DvMF_0804 at 969.710 kb on - strand, within DvMF_0804 at 969.710 kb on - strand, within DvMF_0804 at 969.769 kb on + strand, within DvMF_0804 at 969.777 kb on - strand, within DvMF_0804 at 969.816 kb on + strand, within DvMF_0804 at 969.816 kb on + strand, within DvMF_0804 at 969.822 kb on + strand, within DvMF_0804
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 966,561 - DvMF_0802 0.35 -0.5 966,786 + DvMF_0802 0.52 -0.1 966,810 - DvMF_0802 0.54 +0.1 967,030 + DvMF_0802 0.71 -0.6 967,030 + DvMF_0802 0.71 -0.6 967,038 - DvMF_0802 0.72 -0.5 967,048 + DvMF_0802 0.73 -0.6 967,056 - DvMF_0802 0.73 -0.5 967,139 - DvMF_0802 0.80 +1.2 967,156 - DvMF_0802 0.81 -0.4 967,181 - DvMF_0802 0.83 -1.8 967,205 - DvMF_0802 0.85 -3.5 967,210 - DvMF_0802 0.85 -0.5 967,343 - -0.5 967,377 - -0.9 967,681 + DvMF_0803 0.16 -0.6 967,694 + DvMF_0803 0.16 -0.7 967,735 + DvMF_0803 0.19 +0.1 967,735 + DvMF_0803 0.19 -0.8 967,743 - DvMF_0803 0.19 -1.8 967,868 - DvMF_0803 0.27 -0.5 967,917 + DvMF_0803 0.29 -0.9 967,933 - DvMF_0803 0.30 +0.6 967,982 - DvMF_0803 0.33 -0.5 968,119 - DvMF_0803 0.41 -1.5 968,164 + DvMF_0803 0.44 -0.4 968,251 - DvMF_0803 0.49 -0.3 968,360 - DvMF_0803 0.55 -1.6 968,379 + DvMF_0803 0.56 -0.6 968,444 - DvMF_0803 0.60 -0.6 968,461 + DvMF_0803 0.61 -0.0 968,594 + DvMF_0803 0.68 -2.9 968,768 - DvMF_0803 0.79 -0.6 968,985 - -1.0 969,350 - -1.0 969,423 + +0.1 969,544 + DvMF_0804 0.21 -2.0 969,651 + DvMF_0804 0.46 -0.0 969,651 + DvMF_0804 0.46 +0.4 969,710 - DvMF_0804 0.60 -0.6 969,710 - DvMF_0804 0.60 -0.1 969,769 + DvMF_0804 0.75 -0.4 969,777 - DvMF_0804 0.76 -3.9 969,816 + DvMF_0804 0.86 -1.1 969,816 + DvMF_0804 0.86 +0.2 969,822 + DvMF_0804 0.87 -1.2
Or see this region's nucleotide sequence