Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0737 and DvMF_0738 overlap by 4 nucleotides DvMF_0738 and DvMF_0739 are separated by 1 nucleotides DvMF_0739 and DvMF_0740 overlap by 14 nucleotides DvMF_0740 and DvMF_0741 are separated by 187 nucleotides DvMF_0741 and DvMF_0742 are separated by 3 nucleotides
DvMF_0737: DvMF_0737 - protein of unknown function DUF1320 (RefSeq), at 885,398 to 885,817
_0737
DvMF_0738: DvMF_0738 - Domain of unknown function DUF1834 (RefSeq), at 885,814 to 886,434
_0738
DvMF_0739: DvMF_0739 - hypothetical protein (RefSeq), at 886,436 to 886,639
_0739
DvMF_0740: DvMF_0740 - Mu tail sheath family protein (RefSeq), at 886,626 to 888,047
_0740
DvMF_0741: DvMF_0741 - hypothetical protein (RefSeq), at 888,235 to 888,609
_0741
DvMF_0742: DvMF_0742 - hypothetical protein (RefSeq), at 888,613 to 888,942
_0742
Position (kb) 886
887
888
889 Strain fitness (log2 ratio) -1
0
1 at 886.137 kb on - strand, within DvMF_0738 at 886.213 kb on + strand, within DvMF_0738 at 886.458 kb on + strand, within DvMF_0739 at 886.537 kb on - strand, within DvMF_0739 at 886.885 kb on + strand, within DvMF_0740 at 887.030 kb on + strand, within DvMF_0740 at 887.147 kb on + strand, within DvMF_0740 at 887.337 kb on - strand, within DvMF_0740 at 887.348 kb on + strand, within DvMF_0740 at 887.480 kb on - strand, within DvMF_0740 at 887.480 kb on - strand, within DvMF_0740 at 887.635 kb on - strand, within DvMF_0740 at 887.642 kb on - strand, within DvMF_0740 at 887.655 kb on - strand, within DvMF_0740 at 887.869 kb on + strand, within DvMF_0740 at 888.233 kb on - strand at 888.239 kb on - strand at 888.395 kb on - strand, within DvMF_0741 at 888.400 kb on - strand, within DvMF_0741 at 888.843 kb on + strand, within DvMF_0742
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 886,137 - DvMF_0738 0.52 +0.3 886,213 + DvMF_0738 0.64 -0.3 886,458 + DvMF_0739 0.11 -0.7 886,537 - DvMF_0739 0.50 -0.9 886,885 + DvMF_0740 0.18 -0.6 887,030 + DvMF_0740 0.28 -0.1 887,147 + DvMF_0740 0.37 -0.2 887,337 - DvMF_0740 0.50 +0.6 887,348 + DvMF_0740 0.51 -1.0 887,480 - DvMF_0740 0.60 +0.8 887,480 - DvMF_0740 0.60 -0.3 887,635 - DvMF_0740 0.71 -0.9 887,642 - DvMF_0740 0.71 -0.0 887,655 - DvMF_0740 0.72 -0.0 887,869 + DvMF_0740 0.87 -0.2 888,233 - -0.2 888,239 - -0.6 888,395 - DvMF_0741 0.43 -0.1 888,400 - DvMF_0741 0.44 -0.2 888,843 + DvMF_0742 0.70 +0.4
Or see this region's nucleotide sequence