Experiment: MoLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0392 and DvMF_0393 are separated by 369 nucleotides DvMF_0393 and DvMF_0394 are separated by 305 nucleotides DvMF_0394 and DvMF_0395 are separated by 138 nucleotides
DvMF_0392: DvMF_0392 - integral membrane sensor hybrid histidine kinase (RefSeq), at 460,888 to 463,176
_0392
DvMF_0393: DvMF_0393 - cation diffusion facilitator family transporter (RefSeq), at 463,546 to 464,997
_0393
DvMF_0394: DvMF_0394 - protein of unknown function DUF1653 (RefSeq), at 465,303 to 465,671
_0394
DvMF_0395: DvMF_0395 - protein of unknown function DUF162 (RefSeq), at 465,810 to 466,466
_0395
Position (kb)
463
464
465 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 462.563 kb on + strand, within DvMF_0392 at 462.686 kb on + strand, within DvMF_0392 at 462.731 kb on - strand, within DvMF_0392 at 462.766 kb on - strand, within DvMF_0392 at 463.118 kb on - strand at 463.454 kb on + strand at 463.478 kb on - strand at 463.704 kb on + strand, within DvMF_0393 at 463.834 kb on - strand, within DvMF_0393 at 463.841 kb on + strand, within DvMF_0393 at 463.864 kb on - strand, within DvMF_0393 at 464.054 kb on + strand, within DvMF_0393 at 464.366 kb on - strand, within DvMF_0393 at 464.366 kb on - strand, within DvMF_0393 at 464.633 kb on - strand, within DvMF_0393 at 464.685 kb on - strand, within DvMF_0393 at 464.685 kb on - strand, within DvMF_0393 at 464.685 kb on - strand, within DvMF_0393 at 464.838 kb on + strand, within DvMF_0393 at 464.858 kb on + strand at 465.002 kb on + strand at 465.002 kb on + strand at 465.056 kb on + strand at 465.467 kb on + strand, within DvMF_0394 at 465.475 kb on - strand, within DvMF_0394 at 465.485 kb on + strand, within DvMF_0394 at 465.493 kb on - strand, within DvMF_0394 at 465.844 kb on - strand at 465.883 kb on + strand, within DvMF_0395 at 465.898 kb on + strand, within DvMF_0395
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with D-Cycloserine 0.25 mg/ml remove 462,563 + DvMF_0392 0.73 -0.8 462,686 + DvMF_0392 0.79 -1.1 462,731 - DvMF_0392 0.81 -0.5 462,766 - DvMF_0392 0.82 +0.7 463,118 - -0.0 463,454 + -0.6 463,478 - -0.8 463,704 + DvMF_0393 0.11 +1.1 463,834 - DvMF_0393 0.20 +0.0 463,841 + DvMF_0393 0.20 -1.3 463,864 - DvMF_0393 0.22 -0.4 464,054 + DvMF_0393 0.35 -0.0 464,366 - DvMF_0393 0.56 -0.4 464,366 - DvMF_0393 0.56 -0.2 464,633 - DvMF_0393 0.75 -0.5 464,685 - DvMF_0393 0.78 +0.2 464,685 - DvMF_0393 0.78 -0.8 464,685 - DvMF_0393 0.78 -0.7 464,838 + DvMF_0393 0.89 -0.3 464,858 + -2.9 465,002 + -0.5 465,002 + -0.8 465,056 + -0.0 465,467 + DvMF_0394 0.44 -0.5 465,475 - DvMF_0394 0.47 -0.9 465,485 + DvMF_0394 0.49 -0.3 465,493 - DvMF_0394 0.51 +0.0 465,844 - -0.3 465,883 + DvMF_0395 0.11 -0.4 465,898 + DvMF_0395 0.13 -1.0
Or see this region's nucleotide sequence