Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_823 and Pf6N2E2_824 overlap by 4 nucleotides Pf6N2E2_824 and Pf6N2E2_825 are separated by 15 nucleotides
Pf6N2E2_823 - Outer membrane protein OprN, at 958,560 to 959,981
_823
Pf6N2E2_824 - Multidrug efflux transporter MexF, at 959,978 to 963,157
_824
Pf6N2E2_825 - Multidrug efflux membrane fusion protein MexE, at 963,173 to 964,426
_825
Position (kb)
959
960
961
962
963
964 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 959.446 kb on + strand, within Pf6N2E2_823 at 959.488 kb on + strand, within Pf6N2E2_823 at 959.593 kb on + strand, within Pf6N2E2_823 at 959.911 kb on + strand at 959.911 kb on + strand at 960.053 kb on + strand at 960.053 kb on + strand at 960.054 kb on - strand at 960.054 kb on - strand at 960.057 kb on + strand at 960.057 kb on + strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.058 kb on - strand at 960.277 kb on + strand at 960.277 kb on + strand at 960.278 kb on - strand at 960.332 kb on + strand, within Pf6N2E2_824 at 960.456 kb on + strand, within Pf6N2E2_824 at 960.456 kb on + strand, within Pf6N2E2_824 at 960.488 kb on + strand, within Pf6N2E2_824 at 960.488 kb on + strand, within Pf6N2E2_824 at 960.489 kb on - strand, within Pf6N2E2_824 at 960.489 kb on - strand, within Pf6N2E2_824 at 960.540 kb on + strand, within Pf6N2E2_824 at 960.540 kb on + strand, within Pf6N2E2_824 at 960.561 kb on + strand, within Pf6N2E2_824 at 960.562 kb on - strand, within Pf6N2E2_824 at 960.631 kb on - strand, within Pf6N2E2_824 at 960.678 kb on + strand, within Pf6N2E2_824 at 960.678 kb on + strand, within Pf6N2E2_824 at 960.828 kb on + strand, within Pf6N2E2_824 at 960.829 kb on - strand, within Pf6N2E2_824 at 960.829 kb on - strand, within Pf6N2E2_824 at 960.829 kb on - strand, within Pf6N2E2_824 at 960.861 kb on + strand, within Pf6N2E2_824 at 960.861 kb on + strand, within Pf6N2E2_824 at 960.862 kb on - strand, within Pf6N2E2_824 at 960.876 kb on + strand, within Pf6N2E2_824 at 960.876 kb on + strand, within Pf6N2E2_824 at 960.877 kb on - strand, within Pf6N2E2_824 at 960.877 kb on - strand, within Pf6N2E2_824 at 960.975 kb on + strand, within Pf6N2E2_824 at 960.976 kb on - strand, within Pf6N2E2_824 at 960.976 kb on - strand, within Pf6N2E2_824 at 961.044 kb on + strand, within Pf6N2E2_824 at 961.044 kb on + strand, within Pf6N2E2_824 at 961.045 kb on - strand at 961.056 kb on + strand, within Pf6N2E2_824 at 961.146 kb on + strand, within Pf6N2E2_824 at 961.146 kb on + strand, within Pf6N2E2_824 at 961.147 kb on - strand, within Pf6N2E2_824 at 961.147 kb on - strand, within Pf6N2E2_824 at 961.147 kb on - strand, within Pf6N2E2_824 at 961.147 kb on - strand, within Pf6N2E2_824 at 961.168 kb on - strand, within Pf6N2E2_824 at 961.168 kb on - strand, within Pf6N2E2_824 at 961.419 kb on + strand, within Pf6N2E2_824 at 961.419 kb on + strand, within Pf6N2E2_824 at 961.419 kb on + strand, within Pf6N2E2_824 at 961.497 kb on + strand, within Pf6N2E2_824 at 961.551 kb on + strand, within Pf6N2E2_824 at 961.551 kb on + strand, within Pf6N2E2_824 at 961.551 kb on + strand, within Pf6N2E2_824 at 961.551 kb on + strand, within Pf6N2E2_824 at 961.551 kb on + strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.552 kb on - strand, within Pf6N2E2_824 at 961.750 kb on + strand, within Pf6N2E2_824 at 961.751 kb on - strand, within Pf6N2E2_824 at 961.751 kb on - strand, within Pf6N2E2_824 at 961.752 kb on + strand, within Pf6N2E2_824 at 961.752 kb on + strand, within Pf6N2E2_824 at 961.952 kb on + strand, within Pf6N2E2_824 at 961.952 kb on + strand, within Pf6N2E2_824 at 961.953 kb on - strand, within Pf6N2E2_824 at 961.994 kb on + strand, within Pf6N2E2_824 at 961.994 kb on + strand, within Pf6N2E2_824 at 961.994 kb on + strand, within Pf6N2E2_824 at 961.994 kb on + strand, within Pf6N2E2_824 at 961.995 kb on - strand, within Pf6N2E2_824 at 961.995 kb on - strand, within Pf6N2E2_824 at 961.995 kb on - strand, within Pf6N2E2_824 at 961.995 kb on - strand, within Pf6N2E2_824 at 962.014 kb on + strand, within Pf6N2E2_824 at 962.122 kb on + strand, within Pf6N2E2_824 at 962.122 kb on + strand, within Pf6N2E2_824 at 962.122 kb on + strand, within Pf6N2E2_824 at 962.122 kb on + strand, within Pf6N2E2_824 at 962.122 kb on + strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.123 kb on - strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.126 kb on + strand, within Pf6N2E2_824 at 962.127 kb on - strand, within Pf6N2E2_824 at 962.127 kb on - strand, within Pf6N2E2_824 at 962.127 kb on - strand, within Pf6N2E2_824 at 962.127 kb on - strand, within Pf6N2E2_824 at 962.127 kb on - strand, within Pf6N2E2_824 at 962.169 kb on + strand, within Pf6N2E2_824 at 962.169 kb on + strand, within Pf6N2E2_824 at 962.170 kb on - strand, within Pf6N2E2_824 at 962.181 kb on + strand, within Pf6N2E2_824 at 962.182 kb on - strand, within Pf6N2E2_824 at 962.182 kb on - strand, within Pf6N2E2_824 at 962.426 kb on + strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.427 kb on - strand, within Pf6N2E2_824 at 962.605 kb on - strand, within Pf6N2E2_824 at 962.636 kb on + strand, within Pf6N2E2_824 at 962.636 kb on + strand, within Pf6N2E2_824 at 962.682 kb on + strand, within Pf6N2E2_824 at 962.682 kb on + strand, within Pf6N2E2_824 at 962.683 kb on - strand, within Pf6N2E2_824 at 962.683 kb on - strand, within Pf6N2E2_824 at 962.694 kb on + strand, within Pf6N2E2_824 at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.922 kb on + strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 962.923 kb on - strand at 963.268 kb on + strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.269 kb on - strand at 963.537 kb on + strand, within Pf6N2E2_825 at 963.537 kb on + strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.538 kb on - strand, within Pf6N2E2_825 at 963.541 kb on + strand, within Pf6N2E2_825 at 963.541 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.570 kb on + strand, within Pf6N2E2_825 at 963.571 kb on - strand, within Pf6N2E2_825 at 963.585 kb on + strand, within Pf6N2E2_825 at 963.586 kb on - strand, within Pf6N2E2_825 at 963.711 kb on + strand, within Pf6N2E2_825 at 963.711 kb on + strand, within Pf6N2E2_825 at 963.712 kb on - strand, within Pf6N2E2_825 at 963.759 kb on + strand, within Pf6N2E2_825 at 963.759 kb on + strand, within Pf6N2E2_825 at 963.760 kb on - strand, within Pf6N2E2_825 at 963.792 kb on + strand, within Pf6N2E2_825 at 963.798 kb on + strand, within Pf6N2E2_825 at 963.799 kb on - strand, within Pf6N2E2_825 at 964.118 kb on + strand, within Pf6N2E2_825 at 964.119 kb on - strand, within Pf6N2E2_825
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 959,446 + Pf6N2E2_823 0.62 +0.1 959,488 + Pf6N2E2_823 0.65 -0.8 959,593 + Pf6N2E2_823 0.73 -0.5 959,911 + -0.2 959,911 + -1.5 960,053 + -1.2 960,053 + -0.6 960,054 - -0.1 960,054 - -0.7 960,057 + -1.0 960,057 + -1.1 960,058 - -0.6 960,058 - +0.5 960,058 - -0.3 960,058 - +0.1 960,058 - +0.4 960,058 - -3.0 960,058 - -0.3 960,058 - -1.4 960,277 + -0.6 960,277 + -0.7 960,278 - -0.7 960,332 + Pf6N2E2_824 0.11 -0.6 960,456 + Pf6N2E2_824 0.15 -0.4 960,456 + Pf6N2E2_824 0.15 +0.8 960,488 + Pf6N2E2_824 0.16 -0.6 960,488 + Pf6N2E2_824 0.16 -0.8 960,489 - Pf6N2E2_824 0.16 -0.6 960,489 - Pf6N2E2_824 0.16 -1.9 960,540 + Pf6N2E2_824 0.18 -1.0 960,540 + Pf6N2E2_824 0.18 -0.1 960,561 + Pf6N2E2_824 0.18 -1.9 960,562 - Pf6N2E2_824 0.18 -2.5 960,631 - Pf6N2E2_824 0.21 +0.8 960,678 + Pf6N2E2_824 0.22 -1.0 960,678 + Pf6N2E2_824 0.22 -1.7 960,828 + Pf6N2E2_824 0.27 -0.9 960,829 - Pf6N2E2_824 0.27 +0.1 960,829 - Pf6N2E2_824 0.27 -3.1 960,829 - Pf6N2E2_824 0.27 -1.6 960,861 + Pf6N2E2_824 0.28 -1.1 960,861 + Pf6N2E2_824 0.28 +0.3 960,862 - Pf6N2E2_824 0.28 -1.4 960,876 + Pf6N2E2_824 0.28 +0.2 960,876 + Pf6N2E2_824 0.28 -2.4 960,877 - Pf6N2E2_824 0.28 -0.6 960,877 - Pf6N2E2_824 0.28 -1.8 960,975 + Pf6N2E2_824 0.31 -1.6 960,976 - Pf6N2E2_824 0.31 -1.9 960,976 - Pf6N2E2_824 0.31 -1.9 961,044 + Pf6N2E2_824 0.34 -1.1 961,044 + Pf6N2E2_824 0.34 -0.9 961,045 - -0.9 961,056 + Pf6N2E2_824 0.34 -0.4 961,146 + Pf6N2E2_824 0.37 -1.0 961,146 + Pf6N2E2_824 0.37 -0.1 961,147 - Pf6N2E2_824 0.37 -2.0 961,147 - Pf6N2E2_824 0.37 +0.4 961,147 - Pf6N2E2_824 0.37 -2.1 961,147 - Pf6N2E2_824 0.37 -1.2 961,168 - Pf6N2E2_824 0.37 -1.2 961,168 - Pf6N2E2_824 0.37 -2.1 961,419 + Pf6N2E2_824 0.45 +0.3 961,419 + Pf6N2E2_824 0.45 -0.9 961,419 + Pf6N2E2_824 0.45 -0.8 961,497 + Pf6N2E2_824 0.48 -1.4 961,551 + Pf6N2E2_824 0.49 -0.4 961,551 + Pf6N2E2_824 0.49 -0.6 961,551 + Pf6N2E2_824 0.49 -1.2 961,551 + Pf6N2E2_824 0.49 +0.1 961,551 + Pf6N2E2_824 0.49 -0.6 961,552 - Pf6N2E2_824 0.49 +0.4 961,552 - Pf6N2E2_824 0.49 +0.1 961,552 - Pf6N2E2_824 0.49 -0.9 961,552 - Pf6N2E2_824 0.49 -1.7 961,552 - Pf6N2E2_824 0.49 -0.9 961,552 - Pf6N2E2_824 0.49 -0.4 961,750 + Pf6N2E2_824 0.56 -1.7 961,751 - Pf6N2E2_824 0.56 -0.8 961,751 - Pf6N2E2_824 0.56 -1.7 961,752 + Pf6N2E2_824 0.56 -0.2 961,752 + Pf6N2E2_824 0.56 -1.2 961,952 + Pf6N2E2_824 0.62 -0.6 961,952 + Pf6N2E2_824 0.62 -1.4 961,953 - Pf6N2E2_824 0.62 -0.5 961,994 + Pf6N2E2_824 0.63 -0.3 961,994 + Pf6N2E2_824 0.63 -0.2 961,994 + Pf6N2E2_824 0.63 -2.2 961,994 + Pf6N2E2_824 0.63 -1.6 961,995 - Pf6N2E2_824 0.63 -0.5 961,995 - Pf6N2E2_824 0.63 -2.1 961,995 - Pf6N2E2_824 0.63 -2.8 961,995 - Pf6N2E2_824 0.63 -1.7 962,014 + Pf6N2E2_824 0.64 -0.8 962,122 + Pf6N2E2_824 0.67 -1.0 962,122 + Pf6N2E2_824 0.67 -0.0 962,122 + Pf6N2E2_824 0.67 -1.5 962,122 + Pf6N2E2_824 0.67 -0.9 962,122 + Pf6N2E2_824 0.67 -0.4 962,123 - Pf6N2E2_824 0.67 -2.2 962,123 - Pf6N2E2_824 0.67 +0.0 962,123 - Pf6N2E2_824 0.67 +0.1 962,123 - Pf6N2E2_824 0.67 -1.8 962,123 - Pf6N2E2_824 0.67 -1.5 962,123 - Pf6N2E2_824 0.67 -1.7 962,123 - Pf6N2E2_824 0.67 -0.8 962,123 - Pf6N2E2_824 0.67 -0.2 962,126 + Pf6N2E2_824 0.68 -1.4 962,126 + Pf6N2E2_824 0.68 -1.7 962,126 + Pf6N2E2_824 0.68 -0.6 962,126 + Pf6N2E2_824 0.68 -0.4 962,126 + Pf6N2E2_824 0.68 -0.9 962,126 + Pf6N2E2_824 0.68 +0.1 962,126 + Pf6N2E2_824 0.68 -0.9 962,127 - Pf6N2E2_824 0.68 -0.2 962,127 - Pf6N2E2_824 0.68 -2.4 962,127 - Pf6N2E2_824 0.68 -0.3 962,127 - Pf6N2E2_824 0.68 +0.1 962,127 - Pf6N2E2_824 0.68 -0.1 962,169 + Pf6N2E2_824 0.69 -0.2 962,169 + Pf6N2E2_824 0.69 -1.9 962,170 - Pf6N2E2_824 0.69 -0.7 962,181 + Pf6N2E2_824 0.69 -0.9 962,182 - Pf6N2E2_824 0.69 -0.2 962,182 - Pf6N2E2_824 0.69 +0.2 962,426 + Pf6N2E2_824 0.77 -1.9 962,427 - Pf6N2E2_824 0.77 -1.9 962,427 - Pf6N2E2_824 0.77 -1.3 962,427 - Pf6N2E2_824 0.77 -2.2 962,427 - Pf6N2E2_824 0.77 +1.7 962,605 - Pf6N2E2_824 0.83 -0.8 962,636 + Pf6N2E2_824 0.84 -1.1 962,636 + Pf6N2E2_824 0.84 -1.3 962,682 + Pf6N2E2_824 0.85 -1.3 962,682 + Pf6N2E2_824 0.85 -0.4 962,683 - Pf6N2E2_824 0.85 -2.1 962,683 - Pf6N2E2_824 0.85 -0.6 962,694 + Pf6N2E2_824 0.85 -0.6 962,922 + +0.5 962,922 + -0.8 962,922 + -2.5 962,922 + -0.2 962,922 + -1.2 962,922 + -0.8 962,922 + -0.6 962,922 + -1.8 962,922 + -0.8 962,922 + -0.7 962,923 - -1.9 962,923 - -1.2 962,923 - -0.4 962,923 - -0.9 962,923 - +0.6 962,923 - -0.7 963,268 + +0.1 963,269 - -1.2 963,269 - -1.9 963,269 - +0.7 963,269 - -1.5 963,537 + Pf6N2E2_825 0.29 -0.9 963,537 + Pf6N2E2_825 0.29 -1.0 963,538 - Pf6N2E2_825 0.29 -0.2 963,538 - Pf6N2E2_825 0.29 -0.2 963,538 - Pf6N2E2_825 0.29 -0.7 963,538 - Pf6N2E2_825 0.29 -0.4 963,538 - Pf6N2E2_825 0.29 -1.4 963,541 + Pf6N2E2_825 0.29 -1.8 963,541 + Pf6N2E2_825 0.29 -0.0 963,570 + Pf6N2E2_825 0.32 -0.9 963,570 + Pf6N2E2_825 0.32 -1.1 963,570 + Pf6N2E2_825 0.32 -0.7 963,570 + Pf6N2E2_825 0.32 -0.1 963,571 - Pf6N2E2_825 0.32 -1.7 963,585 + Pf6N2E2_825 0.33 -1.8 963,586 - Pf6N2E2_825 0.33 +0.2 963,711 + Pf6N2E2_825 0.43 -1.2 963,711 + Pf6N2E2_825 0.43 -0.5 963,712 - Pf6N2E2_825 0.43 -1.2 963,759 + Pf6N2E2_825 0.47 -2.1 963,759 + Pf6N2E2_825 0.47 -1.0 963,760 - Pf6N2E2_825 0.47 -0.4 963,792 + Pf6N2E2_825 0.49 -0.4 963,798 + Pf6N2E2_825 0.50 -0.8 963,799 - Pf6N2E2_825 0.50 -0.7 964,118 + Pf6N2E2_825 0.75 -1.2 964,119 - Pf6N2E2_825 0.75 -0.8
Or see this region's nucleotide sequence