Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5831 and Pf6N2E2_5832 are separated by 30 nucleotides Pf6N2E2_5832 and Pf6N2E2_5833 are separated by 93 nucleotides Pf6N2E2_5833 and Pf6N2E2_5834 are separated by 20 nucleotides
Pf6N2E2_5831 - Major facilitator family transporter, at 6,647,116 to 6,648,582
_5831
Pf6N2E2_5832 - Sulfate and thiosulfate binding protein CysP, at 6,648,613 to 6,649,611
_5832
Pf6N2E2_5833 - Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family, at 6,649,705 to 6,650,529
_5833
Pf6N2E2_5834 - Eukaryotic-type low-affinity urea transporter, at 6,650,550 to 6,651,527
_5834
Position (kb)
6648
6649
6650 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 6647.648 kb on + strand, within Pf6N2E2_5831 at 6647.648 kb on + strand, within Pf6N2E2_5831 at 6647.649 kb on - strand, within Pf6N2E2_5831 at 6647.649 kb on - strand, within Pf6N2E2_5831 at 6647.718 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.002 kb on - strand, within Pf6N2E2_5831 at 6648.057 kb on + strand, within Pf6N2E2_5831 at 6648.129 kb on - strand, within Pf6N2E2_5831 at 6648.219 kb on - strand, within Pf6N2E2_5831 at 6648.219 kb on - strand, within Pf6N2E2_5831 at 6648.221 kb on + strand, within Pf6N2E2_5831 at 6648.222 kb on - strand, within Pf6N2E2_5831 at 6648.222 kb on - strand, within Pf6N2E2_5831 at 6648.222 kb on - strand, within Pf6N2E2_5831 at 6648.496 kb on + strand at 6648.614 kb on + strand at 6648.626 kb on + strand at 6648.737 kb on + strand, within Pf6N2E2_5832 at 6648.737 kb on + strand, within Pf6N2E2_5832 at 6648.737 kb on + strand, within Pf6N2E2_5832 at 6648.738 kb on - strand, within Pf6N2E2_5832 at 6648.773 kb on + strand, within Pf6N2E2_5832 at 6648.773 kb on + strand, within Pf6N2E2_5832 at 6648.773 kb on + strand, within Pf6N2E2_5832 at 6648.773 kb on + strand, within Pf6N2E2_5832 at 6648.774 kb on - strand, within Pf6N2E2_5832 at 6648.815 kb on + strand, within Pf6N2E2_5832 at 6648.815 kb on + strand, within Pf6N2E2_5832 at 6648.815 kb on + strand, within Pf6N2E2_5832 at 6648.815 kb on + strand, within Pf6N2E2_5832 at 6648.816 kb on - strand, within Pf6N2E2_5832 at 6648.824 kb on + strand, within Pf6N2E2_5832 at 6648.825 kb on - strand, within Pf6N2E2_5832 at 6648.915 kb on - strand, within Pf6N2E2_5832 at 6649.118 kb on + strand, within Pf6N2E2_5832 at 6649.118 kb on + strand, within Pf6N2E2_5832 at 6649.119 kb on - strand, within Pf6N2E2_5832 at 6649.119 kb on - strand, within Pf6N2E2_5832 at 6649.136 kb on + strand, within Pf6N2E2_5832 at 6649.136 kb on + strand, within Pf6N2E2_5832 at 6649.136 kb on + strand, within Pf6N2E2_5832 at 6649.136 kb on + strand, within Pf6N2E2_5832 at 6649.136 kb on + strand, within Pf6N2E2_5832 at 6649.137 kb on - strand, within Pf6N2E2_5832 at 6649.137 kb on - strand, within Pf6N2E2_5832 at 6649.137 kb on - strand, within Pf6N2E2_5832 at 6649.137 kb on - strand, within Pf6N2E2_5832 at 6649.137 kb on - strand, within Pf6N2E2_5832 at 6649.142 kb on + strand, within Pf6N2E2_5832 at 6649.142 kb on + strand, within Pf6N2E2_5832 at 6649.143 kb on - strand, within Pf6N2E2_5832 at 6649.490 kb on + strand, within Pf6N2E2_5832 at 6649.490 kb on + strand, within Pf6N2E2_5832 at 6649.490 kb on + strand, within Pf6N2E2_5832 at 6649.491 kb on - strand, within Pf6N2E2_5832 at 6649.491 kb on - strand, within Pf6N2E2_5832 at 6649.491 kb on - strand, within Pf6N2E2_5832 at 6649.491 kb on - strand, within Pf6N2E2_5832 at 6649.499 kb on + strand, within Pf6N2E2_5832 at 6649.500 kb on - strand, within Pf6N2E2_5832 at 6649.520 kb on + strand at 6649.520 kb on + strand at 6649.520 kb on + strand at 6649.521 kb on - strand at 6649.521 kb on - strand at 6649.627 kb on - strand at 6649.627 kb on - strand at 6649.627 kb on - strand at 6649.649 kb on + strand at 6649.662 kb on - strand at 6649.662 kb on - strand at 6649.676 kb on - strand at 6649.872 kb on - strand, within Pf6N2E2_5833 at 6649.970 kb on + strand, within Pf6N2E2_5833 at 6649.970 kb on + strand, within Pf6N2E2_5833 at 6649.970 kb on + strand, within Pf6N2E2_5833 at 6649.970 kb on + strand, within Pf6N2E2_5833 at 6649.970 kb on + strand, within Pf6N2E2_5833 at 6649.971 kb on - strand, within Pf6N2E2_5833 at 6649.971 kb on - strand, within Pf6N2E2_5833 at 6649.971 kb on - strand, within Pf6N2E2_5833 at 6650.021 kb on + strand, within Pf6N2E2_5833 at 6650.021 kb on + strand, within Pf6N2E2_5833 at 6650.021 kb on + strand, within Pf6N2E2_5833 at 6650.022 kb on - strand, within Pf6N2E2_5833 at 6650.022 kb on - strand, within Pf6N2E2_5833 at 6650.114 kb on + strand, within Pf6N2E2_5833 at 6650.114 kb on + strand, within Pf6N2E2_5833 at 6650.114 kb on + strand, within Pf6N2E2_5833 at 6650.115 kb on - strand, within Pf6N2E2_5833 at 6650.115 kb on - strand, within Pf6N2E2_5833 at 6650.132 kb on + strand, within Pf6N2E2_5833 at 6650.195 kb on + strand, within Pf6N2E2_5833 at 6650.195 kb on + strand, within Pf6N2E2_5833 at 6650.196 kb on - strand, within Pf6N2E2_5833 at 6650.210 kb on + strand, within Pf6N2E2_5833 at 6650.210 kb on + strand, within Pf6N2E2_5833 at 6650.211 kb on - strand, within Pf6N2E2_5833 at 6650.211 kb on - strand, within Pf6N2E2_5833 at 6650.211 kb on - strand, within Pf6N2E2_5833 at 6650.213 kb on + strand, within Pf6N2E2_5833 at 6650.213 kb on + strand, within Pf6N2E2_5833 at 6650.214 kb on - strand, within Pf6N2E2_5833 at 6650.276 kb on + strand, within Pf6N2E2_5833 at 6650.277 kb on - strand, within Pf6N2E2_5833 at 6650.277 kb on - strand, within Pf6N2E2_5833 at 6650.281 kb on + strand, within Pf6N2E2_5833 at 6650.301 kb on - strand, within Pf6N2E2_5833 at 6650.316 kb on - strand, within Pf6N2E2_5833 at 6650.373 kb on - strand, within Pf6N2E2_5833 at 6650.379 kb on + strand, within Pf6N2E2_5833 at 6650.379 kb on + strand, within Pf6N2E2_5833 at 6650.496 kb on - strand at 6650.496 kb on - strand at 6650.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 6,647,648 + Pf6N2E2_5831 0.36 +0.4 6,647,648 + Pf6N2E2_5831 0.36 -0.0 6,647,649 - Pf6N2E2_5831 0.36 -0.3 6,647,649 - Pf6N2E2_5831 0.36 -0.3 6,647,718 - Pf6N2E2_5831 0.41 -0.5 6,648,002 - Pf6N2E2_5831 0.60 +0.9 6,648,002 - Pf6N2E2_5831 0.60 +0.7 6,648,002 - Pf6N2E2_5831 0.60 +1.0 6,648,002 - Pf6N2E2_5831 0.60 +0.4 6,648,002 - Pf6N2E2_5831 0.60 -0.3 6,648,002 - Pf6N2E2_5831 0.60 -0.3 6,648,002 - Pf6N2E2_5831 0.60 -0.2 6,648,057 + Pf6N2E2_5831 0.64 +0.3 6,648,129 - Pf6N2E2_5831 0.69 -1.9 6,648,219 - Pf6N2E2_5831 0.75 -0.7 6,648,219 - Pf6N2E2_5831 0.75 +0.5 6,648,221 + Pf6N2E2_5831 0.75 -0.9 6,648,222 - Pf6N2E2_5831 0.75 -0.9 6,648,222 - Pf6N2E2_5831 0.75 -1.3 6,648,222 - Pf6N2E2_5831 0.75 +0.7 6,648,496 + -1.4 6,648,614 + -0.4 6,648,626 + -2.3 6,648,737 + Pf6N2E2_5832 0.12 -1.7 6,648,737 + Pf6N2E2_5832 0.12 -1.8 6,648,737 + Pf6N2E2_5832 0.12 -3.2 6,648,738 - Pf6N2E2_5832 0.13 -3.5 6,648,773 + Pf6N2E2_5832 0.16 -3.0 6,648,773 + Pf6N2E2_5832 0.16 -2.5 6,648,773 + Pf6N2E2_5832 0.16 -2.9 6,648,773 + Pf6N2E2_5832 0.16 -1.3 6,648,774 - Pf6N2E2_5832 0.16 -2.0 6,648,815 + Pf6N2E2_5832 0.20 +0.4 6,648,815 + Pf6N2E2_5832 0.20 -1.1 6,648,815 + Pf6N2E2_5832 0.20 -0.7 6,648,815 + Pf6N2E2_5832 0.20 -3.7 6,648,816 - Pf6N2E2_5832 0.20 -2.2 6,648,824 + Pf6N2E2_5832 0.21 -1.4 6,648,825 - Pf6N2E2_5832 0.21 -2.0 6,648,915 - Pf6N2E2_5832 0.30 -1.7 6,649,118 + Pf6N2E2_5832 0.51 -3.5 6,649,118 + Pf6N2E2_5832 0.51 -1.8 6,649,119 - Pf6N2E2_5832 0.51 -2.4 6,649,119 - Pf6N2E2_5832 0.51 -1.1 6,649,136 + Pf6N2E2_5832 0.52 -3.0 6,649,136 + Pf6N2E2_5832 0.52 -2.8 6,649,136 + Pf6N2E2_5832 0.52 -2.6 6,649,136 + Pf6N2E2_5832 0.52 -3.1 6,649,136 + Pf6N2E2_5832 0.52 -2.8 6,649,137 - Pf6N2E2_5832 0.52 -3.0 6,649,137 - Pf6N2E2_5832 0.52 -1.4 6,649,137 - Pf6N2E2_5832 0.52 -2.4 6,649,137 - Pf6N2E2_5832 0.52 -1.8 6,649,137 - Pf6N2E2_5832 0.52 -3.8 6,649,142 + Pf6N2E2_5832 0.53 -2.4 6,649,142 + Pf6N2E2_5832 0.53 -3.2 6,649,143 - Pf6N2E2_5832 0.53 -1.0 6,649,490 + Pf6N2E2_5832 0.88 -1.0 6,649,490 + Pf6N2E2_5832 0.88 -2.8 6,649,490 + Pf6N2E2_5832 0.88 -1.6 6,649,491 - Pf6N2E2_5832 0.88 -3.4 6,649,491 - Pf6N2E2_5832 0.88 -1.7 6,649,491 - Pf6N2E2_5832 0.88 -0.6 6,649,491 - Pf6N2E2_5832 0.88 -1.8 6,649,499 + Pf6N2E2_5832 0.89 -1.5 6,649,500 - Pf6N2E2_5832 0.89 -1.7 6,649,520 + -1.4 6,649,520 + -0.5 6,649,520 + -0.1 6,649,521 - -3.1 6,649,521 - -1.6 6,649,627 - +0.4 6,649,627 - -1.5 6,649,627 - -0.5 6,649,649 + -1.9 6,649,662 - -0.6 6,649,662 - +0.3 6,649,676 - -0.4 6,649,872 - Pf6N2E2_5833 0.20 -0.2 6,649,970 + Pf6N2E2_5833 0.32 -2.0 6,649,970 + Pf6N2E2_5833 0.32 -1.6 6,649,970 + Pf6N2E2_5833 0.32 -0.3 6,649,970 + Pf6N2E2_5833 0.32 -3.1 6,649,970 + Pf6N2E2_5833 0.32 -0.0 6,649,971 - Pf6N2E2_5833 0.32 +0.3 6,649,971 - Pf6N2E2_5833 0.32 +0.6 6,649,971 - Pf6N2E2_5833 0.32 -0.0 6,650,021 + Pf6N2E2_5833 0.38 -0.2 6,650,021 + Pf6N2E2_5833 0.38 -2.1 6,650,021 + Pf6N2E2_5833 0.38 -0.3 6,650,022 - Pf6N2E2_5833 0.38 +1.4 6,650,022 - Pf6N2E2_5833 0.38 +1.1 6,650,114 + Pf6N2E2_5833 0.50 -1.0 6,650,114 + Pf6N2E2_5833 0.50 -0.4 6,650,114 + Pf6N2E2_5833 0.50 -0.6 6,650,115 - Pf6N2E2_5833 0.50 +0.2 6,650,115 - Pf6N2E2_5833 0.50 +0.2 6,650,132 + Pf6N2E2_5833 0.52 -0.3 6,650,195 + Pf6N2E2_5833 0.59 -0.8 6,650,195 + Pf6N2E2_5833 0.59 -0.4 6,650,196 - Pf6N2E2_5833 0.60 -0.4 6,650,210 + Pf6N2E2_5833 0.61 -1.5 6,650,210 + Pf6N2E2_5833 0.61 -0.2 6,650,211 - Pf6N2E2_5833 0.61 +0.4 6,650,211 - Pf6N2E2_5833 0.61 -0.0 6,650,211 - Pf6N2E2_5833 0.61 +0.7 6,650,213 + Pf6N2E2_5833 0.62 +0.4 6,650,213 + Pf6N2E2_5833 0.62 +0.1 6,650,214 - Pf6N2E2_5833 0.62 +0.8 6,650,276 + Pf6N2E2_5833 0.69 -0.7 6,650,277 - Pf6N2E2_5833 0.69 +0.8 6,650,277 - Pf6N2E2_5833 0.69 -0.7 6,650,281 + Pf6N2E2_5833 0.70 +0.2 6,650,301 - Pf6N2E2_5833 0.72 +1.4 6,650,316 - Pf6N2E2_5833 0.74 +0.2 6,650,373 - Pf6N2E2_5833 0.81 +0.3 6,650,379 + Pf6N2E2_5833 0.82 -0.5 6,650,379 + Pf6N2E2_5833 0.82 -0.4 6,650,496 - +0.4 6,650,496 - +0.4 6,650,496 - +0.7
Or see this region's nucleotide sequence