Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4523 and Pf6N2E2_4524 are separated by 215 nucleotides Pf6N2E2_4524 and Pf6N2E2_4525 overlap by 4 nucleotides Pf6N2E2_4525 and Pf6N2E2_4526 are separated by 62 nucleotides Pf6N2E2_4526 and Pf6N2E2_4527 overlap by 4 nucleotides
Pf6N2E2_4523 - Esterase A, at 5,258,573 to 5,259,655
_4523
Pf6N2E2_4524 - putative cytochrome P450 hydroxylase, at 5,259,871 to 5,261,088
_4524
Pf6N2E2_4525 - hypothetical protein, at 5,261,085 to 5,261,213
_4525
Pf6N2E2_4526 - Phosphinothricin N-acetyltransferase (EC 2.3.1.-), at 5,261,276 to 5,261,872
_4526
Pf6N2E2_4527 - RNA polymerase sigma-70 factor, ECF subfamily, at 5,261,869 to 5,262,420
_4527
Position (kb) 5259
5260
5261
5262 Strain fitness (log2 ratio) -1
0
1 at 5258.896 kb on - strand, within Pf6N2E2_4523 at 5258.896 kb on - strand, within Pf6N2E2_4523 at 5258.896 kb on - strand, within Pf6N2E2_4523 at 5259.099 kb on + strand, within Pf6N2E2_4523 at 5259.099 kb on + strand, within Pf6N2E2_4523 at 5259.099 kb on + strand, within Pf6N2E2_4523 at 5259.100 kb on - strand, within Pf6N2E2_4523 at 5259.100 kb on - strand, within Pf6N2E2_4523 at 5259.212 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.252 kb on + strand, within Pf6N2E2_4523 at 5259.253 kb on - strand, within Pf6N2E2_4523 at 5259.253 kb on - strand, within Pf6N2E2_4523 at 5259.253 kb on - strand, within Pf6N2E2_4523 at 5259.324 kb on + strand, within Pf6N2E2_4523 at 5259.664 kb on + strand at 5259.925 kb on + strand at 5259.935 kb on - strand at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.000 kb on + strand, within Pf6N2E2_4524 at 5260.001 kb on - strand, within Pf6N2E2_4524 at 5260.298 kb on - strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.432 kb on + strand, within Pf6N2E2_4524 at 5260.433 kb on - strand, within Pf6N2E2_4524 at 5260.433 kb on - strand, within Pf6N2E2_4524 at 5260.450 kb on + strand, within Pf6N2E2_4524 at 5260.451 kb on - strand, within Pf6N2E2_4524 at 5260.451 kb on - strand, within Pf6N2E2_4524 at 5260.451 kb on - strand, within Pf6N2E2_4524 at 5260.715 kb on - strand, within Pf6N2E2_4524 at 5260.915 kb on + strand, within Pf6N2E2_4524 at 5260.915 kb on + strand, within Pf6N2E2_4524 at 5260.915 kb on + strand, within Pf6N2E2_4524 at 5260.973 kb on + strand at 5260.973 kb on + strand at 5260.974 kb on - strand at 5260.974 kb on - strand at 5261.019 kb on - strand at 5261.030 kb on - strand at 5261.359 kb on - strand, within Pf6N2E2_4526 at 5261.439 kb on - strand, within Pf6N2E2_4526 at 5261.499 kb on + strand, within Pf6N2E2_4526 at 5261.500 kb on - strand, within Pf6N2E2_4526 at 5261.570 kb on + strand, within Pf6N2E2_4526 at 5261.571 kb on - strand, within Pf6N2E2_4526 at 5261.574 kb on + strand, within Pf6N2E2_4526 at 5261.574 kb on + strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.575 kb on - strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.673 kb on + strand, within Pf6N2E2_4526 at 5261.674 kb on - strand, within Pf6N2E2_4526 at 5261.674 kb on - strand, within Pf6N2E2_4526 at 5261.674 kb on - strand, within Pf6N2E2_4526 at 5261.674 kb on - strand, within Pf6N2E2_4526 at 5261.674 kb on - strand, within Pf6N2E2_4526 at 5261.758 kb on + strand, within Pf6N2E2_4526 at 5261.758 kb on + strand, within Pf6N2E2_4526 at 5261.759 kb on - strand, within Pf6N2E2_4526 at 5261.786 kb on - strand, within Pf6N2E2_4526 at 5261.786 kb on - strand, within Pf6N2E2_4526 at 5261.888 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 5,258,896 - Pf6N2E2_4523 0.30 +0.0 5,258,896 - Pf6N2E2_4523 0.30 -0.1 5,258,896 - Pf6N2E2_4523 0.30 +0.8 5,259,099 + Pf6N2E2_4523 0.49 -0.6 5,259,099 + Pf6N2E2_4523 0.49 -0.0 5,259,099 + Pf6N2E2_4523 0.49 -1.0 5,259,100 - Pf6N2E2_4523 0.49 +0.2 5,259,100 - Pf6N2E2_4523 0.49 +0.1 5,259,212 + Pf6N2E2_4523 0.59 -0.4 5,259,252 + Pf6N2E2_4523 0.63 -0.7 5,259,252 + Pf6N2E2_4523 0.63 +0.6 5,259,252 + Pf6N2E2_4523 0.63 +0.5 5,259,252 + Pf6N2E2_4523 0.63 -0.2 5,259,252 + Pf6N2E2_4523 0.63 +0.4 5,259,252 + Pf6N2E2_4523 0.63 +0.3 5,259,252 + Pf6N2E2_4523 0.63 +0.5 5,259,252 + Pf6N2E2_4523 0.63 -0.2 5,259,253 - Pf6N2E2_4523 0.63 +0.7 5,259,253 - Pf6N2E2_4523 0.63 +0.0 5,259,253 - Pf6N2E2_4523 0.63 +1.0 5,259,324 + Pf6N2E2_4523 0.69 +0.0 5,259,664 + +0.7 5,259,925 + +0.3 5,259,935 - -0.0 5,260,000 + Pf6N2E2_4524 0.11 -0.3 5,260,000 + Pf6N2E2_4524 0.11 -0.6 5,260,000 + Pf6N2E2_4524 0.11 -0.3 5,260,000 + Pf6N2E2_4524 0.11 +0.5 5,260,000 + Pf6N2E2_4524 0.11 -0.5 5,260,000 + Pf6N2E2_4524 0.11 +0.2 5,260,000 + Pf6N2E2_4524 0.11 -0.5 5,260,001 - Pf6N2E2_4524 0.11 -0.8 5,260,298 - Pf6N2E2_4524 0.35 -0.6 5,260,432 + Pf6N2E2_4524 0.46 +0.0 5,260,432 + Pf6N2E2_4524 0.46 -0.5 5,260,432 + Pf6N2E2_4524 0.46 +0.5 5,260,432 + Pf6N2E2_4524 0.46 +0.2 5,260,432 + Pf6N2E2_4524 0.46 -0.1 5,260,432 + Pf6N2E2_4524 0.46 -0.2 5,260,433 - Pf6N2E2_4524 0.46 -0.3 5,260,433 - Pf6N2E2_4524 0.46 -1.0 5,260,450 + Pf6N2E2_4524 0.48 +0.6 5,260,451 - Pf6N2E2_4524 0.48 +0.0 5,260,451 - Pf6N2E2_4524 0.48 +0.7 5,260,451 - Pf6N2E2_4524 0.48 -0.6 5,260,715 - Pf6N2E2_4524 0.69 +0.7 5,260,915 + Pf6N2E2_4524 0.86 -0.3 5,260,915 + Pf6N2E2_4524 0.86 -0.2 5,260,915 + Pf6N2E2_4524 0.86 +0.1 5,260,973 + +0.4 5,260,973 + +0.4 5,260,974 - +0.3 5,260,974 - -0.1 5,261,019 - +0.2 5,261,030 - +0.8 5,261,359 - Pf6N2E2_4526 0.14 -0.1 5,261,439 - Pf6N2E2_4526 0.27 -0.5 5,261,499 + Pf6N2E2_4526 0.37 -1.5 5,261,500 - Pf6N2E2_4526 0.38 -0.5 5,261,570 + Pf6N2E2_4526 0.49 -0.5 5,261,571 - Pf6N2E2_4526 0.49 +0.0 5,261,574 + Pf6N2E2_4526 0.50 +0.2 5,261,574 + Pf6N2E2_4526 0.50 +1.0 5,261,575 - Pf6N2E2_4526 0.50 -0.6 5,261,575 - Pf6N2E2_4526 0.50 +0.1 5,261,575 - Pf6N2E2_4526 0.50 -0.3 5,261,575 - Pf6N2E2_4526 0.50 +0.8 5,261,575 - Pf6N2E2_4526 0.50 +0.2 5,261,575 - Pf6N2E2_4526 0.50 +0.0 5,261,673 + Pf6N2E2_4526 0.66 +0.2 5,261,673 + Pf6N2E2_4526 0.66 -0.1 5,261,673 + Pf6N2E2_4526 0.66 +0.8 5,261,673 + Pf6N2E2_4526 0.66 +0.5 5,261,673 + Pf6N2E2_4526 0.66 -0.7 5,261,673 + Pf6N2E2_4526 0.66 +0.5 5,261,673 + Pf6N2E2_4526 0.66 -0.3 5,261,673 + Pf6N2E2_4526 0.66 +0.0 5,261,674 - Pf6N2E2_4526 0.67 +0.3 5,261,674 - Pf6N2E2_4526 0.67 +0.0 5,261,674 - Pf6N2E2_4526 0.67 +0.1 5,261,674 - Pf6N2E2_4526 0.67 -0.2 5,261,674 - Pf6N2E2_4526 0.67 -1.3 5,261,758 + Pf6N2E2_4526 0.81 +0.2 5,261,758 + Pf6N2E2_4526 0.81 -0.2 5,261,759 - Pf6N2E2_4526 0.81 +0.5 5,261,786 - Pf6N2E2_4526 0.85 -0.9 5,261,786 - Pf6N2E2_4526 0.85 -0.2 5,261,888 + -0.2
Or see this region's nucleotide sequence