Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3142 and Pf6N2E2_3143 are separated by 104 nucleotides Pf6N2E2_3143 and Pf6N2E2_3144 are separated by 132 nucleotides
Pf6N2E2_3142 - Threonine synthase (EC 4.2.3.1), at 3,634,653 to 3,636,062
_3142
Pf6N2E2_3143 - Homoserine dehydrogenase (EC 1.1.1.3), at 3,636,167 to 3,637,471
_3143
Pf6N2E2_3144 - Thiol:disulfide interchange protein DsbC, at 3,637,604 to 3,638,335
_3144
Position (kb)
3636
3637
3638 Strain fitness (log2 ratio)
-1
0
1 at 3636.169 kb on - strand at 3637.517 kb on - strand at 3637.879 kb on - strand, within Pf6N2E2_3144 at 3637.879 kb on - strand, within Pf6N2E2_3144 at 3637.879 kb on - strand, within Pf6N2E2_3144 at 3637.931 kb on - strand, within Pf6N2E2_3144 at 3637.931 kb on - strand, within Pf6N2E2_3144 at 3637.939 kb on - strand, within Pf6N2E2_3144 at 3637.999 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.122 kb on - strand, within Pf6N2E2_3144 at 3638.143 kb on - strand, within Pf6N2E2_3144 at 3638.176 kb on - strand, within Pf6N2E2_3144 at 3638.176 kb on - strand, within Pf6N2E2_3144 at 3638.430 kb on + strand at 3638.430 kb on + strand at 3638.430 kb on + strand at 3638.430 kb on + strand at 3638.430 kb on + strand at 3638.431 kb on - strand at 3638.431 kb on - strand at 3638.431 kb on - strand at 3638.431 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 3,636,169 - +0.6 3,637,517 - -1.3 3,637,879 - Pf6N2E2_3144 0.38 -0.6 3,637,879 - Pf6N2E2_3144 0.38 +0.7 3,637,879 - Pf6N2E2_3144 0.38 -0.4 3,637,931 - Pf6N2E2_3144 0.45 +0.1 3,637,931 - Pf6N2E2_3144 0.45 +1.2 3,637,939 - Pf6N2E2_3144 0.46 -1.6 3,637,999 - Pf6N2E2_3144 0.54 +0.8 3,638,122 - Pf6N2E2_3144 0.71 +0.7 3,638,122 - Pf6N2E2_3144 0.71 +0.9 3,638,122 - Pf6N2E2_3144 0.71 +0.4 3,638,122 - Pf6N2E2_3144 0.71 +0.9 3,638,122 - Pf6N2E2_3144 0.71 -0.3 3,638,122 - Pf6N2E2_3144 0.71 -0.1 3,638,122 - Pf6N2E2_3144 0.71 +0.7 3,638,122 - Pf6N2E2_3144 0.71 +0.3 3,638,122 - Pf6N2E2_3144 0.71 +0.4 3,638,122 - Pf6N2E2_3144 0.71 +0.6 3,638,143 - Pf6N2E2_3144 0.74 +0.2 3,638,176 - Pf6N2E2_3144 0.78 +0.7 3,638,176 - Pf6N2E2_3144 0.78 +0.8 3,638,430 + -0.6 3,638,430 + +0.1 3,638,430 + +1.1 3,638,430 + +0.1 3,638,430 + -0.1 3,638,431 - +0.7 3,638,431 - -0.2 3,638,431 - -0.5 3,638,431 - +0.8
Or see this region's nucleotide sequence