Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2522 and Pf6N2E2_2523 are separated by 441 nucleotides Pf6N2E2_2523 and Pf6N2E2_2524 are separated by 136 nucleotides
Pf6N2E2_2522 - DNA gyrase subunit A (EC 5.99.1.3), at 2,976,737 to 2,979,400
_2522
Pf6N2E2_2523 - Methylthioribose-1-phosphate isomerase (EC 5.3.1.23), at 2,979,842 to 2,980,888
_2523
Pf6N2E2_2524 - S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase, at 2,981,025 to 2,982,356
_2524
Position (kb)
2979
2980
2981 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2979.621 kb on + strand at 2979.621 kb on + strand at 2979.622 kb on - strand at 2979.622 kb on - strand at 2979.625 kb on + strand at 2979.625 kb on + strand at 2979.626 kb on - strand at 2979.626 kb on - strand at 2979.665 kb on + strand at 2979.665 kb on + strand at 2979.666 kb on - strand at 2979.666 kb on - strand at 2979.666 kb on - strand at 2979.666 kb on - strand at 2979.666 kb on - strand at 2979.759 kb on + strand at 2979.760 kb on - strand at 2979.760 kb on - strand at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.137 kb on + strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.138 kb on - strand, within Pf6N2E2_2523 at 2980.141 kb on + strand, within Pf6N2E2_2523 at 2980.142 kb on - strand, within Pf6N2E2_2523 at 2980.332 kb on + strand, within Pf6N2E2_2523 at 2980.333 kb on - strand, within Pf6N2E2_2523 at 2980.358 kb on - strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.359 kb on + strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.360 kb on - strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.725 kb on + strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.726 kb on - strand, within Pf6N2E2_2523 at 2980.854 kb on + strand at 2980.855 kb on - strand at 2980.855 kb on - strand at 2980.954 kb on + strand at 2980.955 kb on - strand at 2980.955 kb on - strand at 2980.956 kb on + strand at 2980.957 kb on - strand at 2980.957 kb on - strand at 2980.984 kb on + strand at 2980.986 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.001 kb on + strand at 2981.003 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.053 kb on + strand at 2981.056 kb on + strand at 2981.056 kb on + strand at 2981.098 kb on + strand at 2981.098 kb on + strand at 2981.353 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.421 kb on + strand, within Pf6N2E2_2524 at 2981.427 kb on + strand, within Pf6N2E2_2524 at 2981.615 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.681 kb on + strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524 at 2981.682 kb on - strand, within Pf6N2E2_2524
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 2,979,621 + +0.9 2,979,621 + -0.1 2,979,622 - -0.2 2,979,622 - +0.4 2,979,625 + -0.3 2,979,625 + +1.0 2,979,626 - -0.1 2,979,626 - -0.8 2,979,665 + +0.2 2,979,665 + +1.0 2,979,666 - -0.5 2,979,666 - -0.5 2,979,666 - +1.8 2,979,666 - +1.7 2,979,666 - -0.1 2,979,759 + +0.2 2,979,760 - -0.7 2,979,760 - -0.1 2,980,137 + Pf6N2E2_2523 0.28 -0.3 2,980,137 + Pf6N2E2_2523 0.28 -0.2 2,980,137 + Pf6N2E2_2523 0.28 -0.5 2,980,137 + Pf6N2E2_2523 0.28 +1.0 2,980,137 + Pf6N2E2_2523 0.28 -2.8 2,980,137 + Pf6N2E2_2523 0.28 -0.2 2,980,137 + Pf6N2E2_2523 0.28 -0.8 2,980,137 + Pf6N2E2_2523 0.28 -1.2 2,980,137 + Pf6N2E2_2523 0.28 +0.0 2,980,137 + Pf6N2E2_2523 0.28 -0.7 2,980,138 - Pf6N2E2_2523 0.28 -1.4 2,980,138 - Pf6N2E2_2523 0.28 -0.5 2,980,138 - Pf6N2E2_2523 0.28 -0.4 2,980,138 - Pf6N2E2_2523 0.28 -1.0 2,980,138 - Pf6N2E2_2523 0.28 -0.6 2,980,141 + Pf6N2E2_2523 0.29 +1.0 2,980,142 - Pf6N2E2_2523 0.29 -1.4 2,980,332 + Pf6N2E2_2523 0.47 -0.2 2,980,333 - Pf6N2E2_2523 0.47 -0.8 2,980,358 - Pf6N2E2_2523 0.49 +0.1 2,980,359 + Pf6N2E2_2523 0.49 -2.7 2,980,359 + Pf6N2E2_2523 0.49 -1.5 2,980,359 + Pf6N2E2_2523 0.49 -0.0 2,980,359 + Pf6N2E2_2523 0.49 +0.3 2,980,360 - Pf6N2E2_2523 0.49 -0.2 2,980,360 - Pf6N2E2_2523 0.49 -0.8 2,980,360 - Pf6N2E2_2523 0.49 -0.7 2,980,360 - Pf6N2E2_2523 0.49 -1.2 2,980,360 - Pf6N2E2_2523 0.49 -0.6 2,980,360 - Pf6N2E2_2523 0.49 -2.3 2,980,360 - Pf6N2E2_2523 0.49 -1.2 2,980,725 + Pf6N2E2_2523 0.84 +1.3 2,980,725 + Pf6N2E2_2523 0.84 -0.3 2,980,726 - Pf6N2E2_2523 0.84 -0.2 2,980,726 - Pf6N2E2_2523 0.84 -0.2 2,980,726 - Pf6N2E2_2523 0.84 -1.4 2,980,726 - Pf6N2E2_2523 0.84 -0.9 2,980,726 - Pf6N2E2_2523 0.84 +0.0 2,980,726 - Pf6N2E2_2523 0.84 -1.1 2,980,854 + +0.8 2,980,855 - -1.1 2,980,855 - -0.6 2,980,954 + -0.2 2,980,955 - +0.5 2,980,955 - -0.9 2,980,956 + +0.3 2,980,957 - +0.1 2,980,957 - -0.4 2,980,984 + +1.8 2,980,986 + +0.1 2,981,001 + -0.3 2,981,001 + -0.4 2,981,001 + -0.3 2,981,003 + -0.9 2,981,053 + +0.1 2,981,053 + +0.8 2,981,053 + +0.4 2,981,053 + +2.0 2,981,053 + -0.5 2,981,053 + +1.2 2,981,056 + +0.9 2,981,056 + +0.6 2,981,098 + +0.5 2,981,098 + -1.3 2,981,353 + Pf6N2E2_2524 0.25 +1.1 2,981,421 + Pf6N2E2_2524 0.30 -0.4 2,981,421 + Pf6N2E2_2524 0.30 +1.0 2,981,421 + Pf6N2E2_2524 0.30 +2.0 2,981,421 + Pf6N2E2_2524 0.30 -1.6 2,981,421 + Pf6N2E2_2524 0.30 +0.2 2,981,421 + Pf6N2E2_2524 0.30 -0.7 2,981,421 + Pf6N2E2_2524 0.30 -1.9 2,981,421 + Pf6N2E2_2524 0.30 +1.1 2,981,421 + Pf6N2E2_2524 0.30 +0.2 2,981,421 + Pf6N2E2_2524 0.30 +0.5 2,981,421 + Pf6N2E2_2524 0.30 +0.6 2,981,421 + Pf6N2E2_2524 0.30 +1.0 2,981,427 + Pf6N2E2_2524 0.30 +0.1 2,981,615 + Pf6N2E2_2524 0.44 -0.3 2,981,681 + Pf6N2E2_2524 0.49 +0.2 2,981,681 + Pf6N2E2_2524 0.49 +1.5 2,981,681 + Pf6N2E2_2524 0.49 +0.1 2,981,682 - Pf6N2E2_2524 0.49 +0.8 2,981,682 - Pf6N2E2_2524 0.49 +0.5
Or see this region's nucleotide sequence