Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2162 and Pf6N2E2_2163 are separated by 251 nucleotides Pf6N2E2_2163 and Pf6N2E2_2164 are separated by 31 nucleotides
Pf6N2E2_2162 - Cytochrome c4, at 2,566,193 to 2,566,855
_2162
Pf6N2E2_2163 - Lysine 2,3-aminomutase (EC 5.4.3.2), at 2,567,107 to 2,568,504
_2163
Pf6N2E2_2164 - hypothetical protein, at 2,568,536 to 2,570,095
_2164
Position (kb)
2567
2568
2569 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2566.110 kb on + strand at 2566.120 kb on - strand at 2566.270 kb on + strand, within Pf6N2E2_2162 at 2566.270 kb on + strand, within Pf6N2E2_2162 at 2566.628 kb on + strand, within Pf6N2E2_2162 at 2566.628 kb on + strand, within Pf6N2E2_2162 at 2566.629 kb on - strand, within Pf6N2E2_2162 at 2566.629 kb on - strand, within Pf6N2E2_2162 at 2566.629 kb on - strand, within Pf6N2E2_2162 at 2566.629 kb on - strand, within Pf6N2E2_2162 at 2566.629 kb on - strand, within Pf6N2E2_2162 at 2566.853 kb on + strand at 2566.870 kb on + strand at 2566.871 kb on - strand at 2566.874 kb on + strand at 2566.875 kb on - strand at 2566.875 kb on - strand at 2566.875 kb on - strand at 2566.912 kb on + strand at 2566.920 kb on + strand at 2566.920 kb on + strand at 2566.992 kb on + strand at 2567.074 kb on - strand at 2567.198 kb on + strand at 2567.313 kb on + strand, within Pf6N2E2_2163 at 2567.425 kb on + strand, within Pf6N2E2_2163 at 2567.425 kb on + strand, within Pf6N2E2_2163 at 2567.425 kb on + strand, within Pf6N2E2_2163 at 2567.425 kb on + strand, within Pf6N2E2_2163 at 2567.425 kb on + strand, within Pf6N2E2_2163 at 2567.426 kb on - strand, within Pf6N2E2_2163 at 2567.426 kb on - strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.427 kb on + strand, within Pf6N2E2_2163 at 2567.428 kb on - strand, within Pf6N2E2_2163 at 2567.428 kb on - strand, within Pf6N2E2_2163 at 2567.428 kb on - strand, within Pf6N2E2_2163 at 2567.459 kb on - strand, within Pf6N2E2_2163 at 2567.654 kb on - strand, within Pf6N2E2_2163 at 2567.738 kb on + strand, within Pf6N2E2_2163 at 2567.738 kb on + strand, within Pf6N2E2_2163 at 2567.738 kb on + strand, within Pf6N2E2_2163 at 2567.738 kb on + strand, within Pf6N2E2_2163 at 2567.738 kb on + strand, within Pf6N2E2_2163 at 2567.739 kb on - strand, within Pf6N2E2_2163 at 2567.739 kb on - strand, within Pf6N2E2_2163 at 2567.739 kb on - strand, within Pf6N2E2_2163 at 2567.765 kb on + strand, within Pf6N2E2_2163 at 2567.765 kb on + strand, within Pf6N2E2_2163 at 2567.765 kb on + strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.766 kb on - strand, within Pf6N2E2_2163 at 2567.849 kb on + strand, within Pf6N2E2_2163 at 2567.849 kb on + strand, within Pf6N2E2_2163 at 2567.850 kb on - strand, within Pf6N2E2_2163 at 2568.009 kb on - strand, within Pf6N2E2_2163 at 2568.043 kb on + strand, within Pf6N2E2_2163 at 2568.044 kb on - strand, within Pf6N2E2_2163 at 2568.044 kb on - strand, within Pf6N2E2_2163 at 2568.044 kb on - strand, within Pf6N2E2_2163 at 2568.135 kb on - strand, within Pf6N2E2_2163 at 2568.139 kb on + strand, within Pf6N2E2_2163 at 2568.139 kb on + strand, within Pf6N2E2_2163 at 2568.158 kb on - strand, within Pf6N2E2_2163 at 2568.158 kb on - strand, within Pf6N2E2_2163 at 2568.161 kb on - strand, within Pf6N2E2_2163 at 2568.161 kb on - strand, within Pf6N2E2_2163 at 2568.161 kb on - strand, within Pf6N2E2_2163 at 2568.265 kb on - strand, within Pf6N2E2_2163 at 2568.322 kb on - strand, within Pf6N2E2_2163 at 2568.322 kb on - strand, within Pf6N2E2_2163 at 2568.322 kb on - strand, within Pf6N2E2_2163 at 2568.325 kb on + strand, within Pf6N2E2_2163 at 2568.325 kb on + strand, within Pf6N2E2_2163 at 2568.325 kb on + strand, within Pf6N2E2_2163 at 2568.325 kb on + strand, within Pf6N2E2_2163 at 2568.326 kb on - strand, within Pf6N2E2_2163 at 2568.326 kb on - strand, within Pf6N2E2_2163 at 2568.326 kb on - strand, within Pf6N2E2_2163 at 2568.326 kb on - strand, within Pf6N2E2_2163 at 2568.326 kb on - strand, within Pf6N2E2_2163 at 2568.331 kb on + strand, within Pf6N2E2_2163 at 2568.332 kb on - strand, within Pf6N2E2_2163 at 2568.334 kb on + strand, within Pf6N2E2_2163 at 2568.334 kb on + strand, within Pf6N2E2_2163 at 2568.334 kb on + strand, within Pf6N2E2_2163 at 2568.401 kb on - strand at 2568.401 kb on - strand at 2568.417 kb on + strand at 2568.486 kb on - strand at 2568.502 kb on + strand at 2568.502 kb on + strand at 2568.502 kb on + strand at 2568.502 kb on + strand at 2568.503 kb on - strand at 2568.503 kb on - strand at 2568.532 kb on - strand at 2568.571 kb on + strand at 2568.572 kb on - strand at 2568.572 kb on - strand at 2568.572 kb on - strand at 2568.572 kb on - strand at 2568.578 kb on + strand at 2568.578 kb on + strand at 2568.578 kb on + strand at 2568.579 kb on - strand at 2568.579 kb on - strand at 2568.579 kb on - strand at 2568.579 kb on - strand at 2568.579 kb on - strand at 2568.629 kb on + strand at 2568.630 kb on - strand at 2568.630 kb on - strand at 2568.630 kb on - strand at 2568.659 kb on - strand at 2568.697 kb on + strand, within Pf6N2E2_2164 at 2568.842 kb on + strand, within Pf6N2E2_2164 at 2568.842 kb on + strand, within Pf6N2E2_2164 at 2568.842 kb on + strand, within Pf6N2E2_2164 at 2568.843 kb on - strand, within Pf6N2E2_2164 at 2568.847 kb on + strand, within Pf6N2E2_2164 at 2568.847 kb on + strand, within Pf6N2E2_2164 at 2568.847 kb on + strand, within Pf6N2E2_2164 at 2568.992 kb on + strand, within Pf6N2E2_2164 at 2569.103 kb on + strand, within Pf6N2E2_2164 at 2569.254 kb on - strand, within Pf6N2E2_2164 at 2569.289 kb on + strand, within Pf6N2E2_2164 at 2569.289 kb on + strand, within Pf6N2E2_2164 at 2569.290 kb on - strand, within Pf6N2E2_2164 at 2569.466 kb on + strand, within Pf6N2E2_2164
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 2,566,110 + +0.7 2,566,120 - -1.1 2,566,270 + Pf6N2E2_2162 0.12 +0.9 2,566,270 + Pf6N2E2_2162 0.12 -0.1 2,566,628 + Pf6N2E2_2162 0.66 -0.5 2,566,628 + Pf6N2E2_2162 0.66 +1.2 2,566,629 - Pf6N2E2_2162 0.66 -0.4 2,566,629 - Pf6N2E2_2162 0.66 -0.3 2,566,629 - Pf6N2E2_2162 0.66 +0.2 2,566,629 - Pf6N2E2_2162 0.66 +0.8 2,566,629 - Pf6N2E2_2162 0.66 +0.1 2,566,853 + +0.1 2,566,870 + +0.8 2,566,871 - +1.4 2,566,874 + -0.5 2,566,875 - -1.4 2,566,875 - +0.5 2,566,875 - +0.4 2,566,912 + +0.6 2,566,920 + -1.5 2,566,920 + +0.5 2,566,992 + -1.8 2,567,074 - +0.5 2,567,198 + +2.0 2,567,313 + Pf6N2E2_2163 0.15 +0.6 2,567,425 + Pf6N2E2_2163 0.23 -1.7 2,567,425 + Pf6N2E2_2163 0.23 -1.1 2,567,425 + Pf6N2E2_2163 0.23 -0.4 2,567,425 + Pf6N2E2_2163 0.23 -0.2 2,567,425 + Pf6N2E2_2163 0.23 -0.7 2,567,426 - Pf6N2E2_2163 0.23 +1.0 2,567,426 - Pf6N2E2_2163 0.23 +0.1 2,567,427 + Pf6N2E2_2163 0.23 -0.2 2,567,427 + Pf6N2E2_2163 0.23 -0.1 2,567,427 + Pf6N2E2_2163 0.23 +0.8 2,567,427 + Pf6N2E2_2163 0.23 -0.1 2,567,427 + Pf6N2E2_2163 0.23 +0.2 2,567,427 + Pf6N2E2_2163 0.23 +0.3 2,567,428 - Pf6N2E2_2163 0.23 -1.0 2,567,428 - Pf6N2E2_2163 0.23 -0.1 2,567,428 - Pf6N2E2_2163 0.23 +1.5 2,567,459 - Pf6N2E2_2163 0.25 -0.2 2,567,654 - Pf6N2E2_2163 0.39 +0.8 2,567,738 + Pf6N2E2_2163 0.45 +0.3 2,567,738 + Pf6N2E2_2163 0.45 +0.7 2,567,738 + Pf6N2E2_2163 0.45 +0.9 2,567,738 + Pf6N2E2_2163 0.45 +1.1 2,567,738 + Pf6N2E2_2163 0.45 +0.1 2,567,739 - Pf6N2E2_2163 0.45 -1.6 2,567,739 - Pf6N2E2_2163 0.45 +1.0 2,567,739 - Pf6N2E2_2163 0.45 +0.2 2,567,765 + Pf6N2E2_2163 0.47 +0.3 2,567,765 + Pf6N2E2_2163 0.47 -0.6 2,567,765 + Pf6N2E2_2163 0.47 +1.0 2,567,766 - Pf6N2E2_2163 0.47 +1.3 2,567,766 - Pf6N2E2_2163 0.47 -0.5 2,567,766 - Pf6N2E2_2163 0.47 +0.7 2,567,766 - Pf6N2E2_2163 0.47 +0.5 2,567,766 - Pf6N2E2_2163 0.47 +0.7 2,567,766 - Pf6N2E2_2163 0.47 -0.2 2,567,849 + Pf6N2E2_2163 0.53 +1.2 2,567,849 + Pf6N2E2_2163 0.53 -1.3 2,567,850 - Pf6N2E2_2163 0.53 +0.3 2,568,009 - Pf6N2E2_2163 0.65 +1.0 2,568,043 + Pf6N2E2_2163 0.67 -0.4 2,568,044 - Pf6N2E2_2163 0.67 +0.2 2,568,044 - Pf6N2E2_2163 0.67 +0.4 2,568,044 - Pf6N2E2_2163 0.67 +0.6 2,568,135 - Pf6N2E2_2163 0.74 -0.1 2,568,139 + Pf6N2E2_2163 0.74 +0.3 2,568,139 + Pf6N2E2_2163 0.74 +0.1 2,568,158 - Pf6N2E2_2163 0.75 -0.0 2,568,158 - Pf6N2E2_2163 0.75 +0.8 2,568,161 - Pf6N2E2_2163 0.75 -1.7 2,568,161 - Pf6N2E2_2163 0.75 +0.9 2,568,161 - Pf6N2E2_2163 0.75 -0.2 2,568,265 - Pf6N2E2_2163 0.83 -0.5 2,568,322 - Pf6N2E2_2163 0.87 +0.5 2,568,322 - Pf6N2E2_2163 0.87 -0.4 2,568,322 - Pf6N2E2_2163 0.87 -2.3 2,568,325 + Pf6N2E2_2163 0.87 -0.2 2,568,325 + Pf6N2E2_2163 0.87 +0.8 2,568,325 + Pf6N2E2_2163 0.87 -0.7 2,568,325 + Pf6N2E2_2163 0.87 -0.3 2,568,326 - Pf6N2E2_2163 0.87 +0.7 2,568,326 - Pf6N2E2_2163 0.87 +0.8 2,568,326 - Pf6N2E2_2163 0.87 +0.6 2,568,326 - Pf6N2E2_2163 0.87 +0.6 2,568,326 - Pf6N2E2_2163 0.87 -0.1 2,568,331 + Pf6N2E2_2163 0.88 -0.6 2,568,332 - Pf6N2E2_2163 0.88 +0.4 2,568,334 + Pf6N2E2_2163 0.88 -1.8 2,568,334 + Pf6N2E2_2163 0.88 -1.3 2,568,334 + Pf6N2E2_2163 0.88 -0.7 2,568,401 - +0.2 2,568,401 - -0.9 2,568,417 + +0.4 2,568,486 - +0.9 2,568,502 + -0.3 2,568,502 + +0.7 2,568,502 + -0.2 2,568,502 + +0.0 2,568,503 - +0.3 2,568,503 - -0.8 2,568,532 - -0.4 2,568,571 + +0.5 2,568,572 - -1.4 2,568,572 - +0.2 2,568,572 - +0.4 2,568,572 - +0.1 2,568,578 + -0.7 2,568,578 + -0.4 2,568,578 + +0.2 2,568,579 - +0.0 2,568,579 - -0.2 2,568,579 - +0.3 2,568,579 - -0.5 2,568,579 - -0.9 2,568,629 + -2.4 2,568,630 - +0.8 2,568,630 - +0.8 2,568,630 - +0.4 2,568,659 - -0.1 2,568,697 + Pf6N2E2_2164 0.10 +0.6 2,568,842 + Pf6N2E2_2164 0.20 -0.1 2,568,842 + Pf6N2E2_2164 0.20 +0.5 2,568,842 + Pf6N2E2_2164 0.20 +1.0 2,568,843 - Pf6N2E2_2164 0.20 +0.2 2,568,847 + Pf6N2E2_2164 0.20 -1.2 2,568,847 + Pf6N2E2_2164 0.20 +0.9 2,568,847 + Pf6N2E2_2164 0.20 -0.3 2,568,992 + Pf6N2E2_2164 0.29 +1.7 2,569,103 + Pf6N2E2_2164 0.36 +0.5 2,569,254 - Pf6N2E2_2164 0.46 -0.2 2,569,289 + Pf6N2E2_2164 0.48 -1.2 2,569,289 + Pf6N2E2_2164 0.48 +0.7 2,569,290 - Pf6N2E2_2164 0.48 -0.5 2,569,466 + Pf6N2E2_2164 0.60 -1.1
Or see this region's nucleotide sequence