Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1298 and Pf6N2E2_1299 are separated by 141 nucleotides Pf6N2E2_1299 and Pf6N2E2_1300 are separated by 108 nucleotides Pf6N2E2_1300 and Pf6N2E2_1301 are separated by 157 nucleotides
Pf6N2E2_1298 - Xanthine transporter,putative, at 1,533,013 to 1,534,242
_1298
Pf6N2E2_1299 - Transcriptional regulator, TetR family, at 1,534,384 to 1,535,019
_1299
Pf6N2E2_1300 - Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91), at 1,535,128 to 1,535,919
_1300
Pf6N2E2_1301 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 1,536,077 to 1,537,096
_1301
Position (kb)
1535
1536 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1534.144 kb on + strand at 1534.145 kb on - strand at 1534.145 kb on - strand at 1534.145 kb on - strand at 1534.227 kb on + strand at 1534.228 kb on - strand at 1534.228 kb on - strand at 1534.330 kb on - strand at 1534.562 kb on - strand, within Pf6N2E2_1299 at 1534.567 kb on + strand, within Pf6N2E2_1299 at 1534.568 kb on - strand, within Pf6N2E2_1299 at 1534.632 kb on + strand, within Pf6N2E2_1299 at 1534.633 kb on - strand at 1534.734 kb on - strand, within Pf6N2E2_1299 at 1535.078 kb on + strand at 1535.081 kb on + strand at 1535.081 kb on + strand at 1535.082 kb on - strand at 1535.082 kb on - strand at 1535.082 kb on - strand at 1535.139 kb on - strand at 1535.273 kb on - strand, within Pf6N2E2_1300 at 1535.273 kb on - strand, within Pf6N2E2_1300 at 1535.273 kb on - strand, within Pf6N2E2_1300 at 1535.274 kb on + strand, within Pf6N2E2_1300 at 1535.274 kb on + strand, within Pf6N2E2_1300 at 1535.274 kb on + strand, within Pf6N2E2_1300 at 1535.275 kb on - strand, within Pf6N2E2_1300 at 1535.467 kb on + strand, within Pf6N2E2_1300 at 1535.779 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.830 kb on + strand, within Pf6N2E2_1300 at 1535.831 kb on - strand, within Pf6N2E2_1300 at 1536.111 kb on + strand at 1536.112 kb on - strand at 1536.112 kb on - strand at 1536.405 kb on + strand, within Pf6N2E2_1301 at 1536.405 kb on + strand, within Pf6N2E2_1301 at 1536.406 kb on - strand, within Pf6N2E2_1301 at 1536.421 kb on - strand, within Pf6N2E2_1301 at 1536.492 kb on + strand, within Pf6N2E2_1301 at 1536.492 kb on + strand, within Pf6N2E2_1301 at 1536.619 kb on + strand, within Pf6N2E2_1301 at 1536.619 kb on + strand, within Pf6N2E2_1301 at 1536.619 kb on + strand, within Pf6N2E2_1301 at 1536.619 kb on + strand, within Pf6N2E2_1301 at 1536.620 kb on - strand, within Pf6N2E2_1301 at 1536.620 kb on - strand, within Pf6N2E2_1301 at 1536.778 kb on - strand at 1536.778 kb on - strand, within Pf6N2E2_1301
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 1,534,144 + +0.5 1,534,145 - -0.9 1,534,145 - +0.9 1,534,145 - +0.3 1,534,227 + -0.5 1,534,228 - +1.2 1,534,228 - -0.1 1,534,330 - -0.1 1,534,562 - Pf6N2E2_1299 0.28 +0.9 1,534,567 + Pf6N2E2_1299 0.29 -0.3 1,534,568 - Pf6N2E2_1299 0.29 +0.9 1,534,632 + Pf6N2E2_1299 0.39 -0.3 1,534,633 - +1.3 1,534,734 - Pf6N2E2_1299 0.55 +0.6 1,535,078 + -0.4 1,535,081 + +0.1 1,535,081 + -0.1 1,535,082 - -1.5 1,535,082 - -0.1 1,535,082 - +0.4 1,535,139 - +0.3 1,535,273 - Pf6N2E2_1300 0.18 +0.2 1,535,273 - Pf6N2E2_1300 0.18 +1.0 1,535,273 - Pf6N2E2_1300 0.18 +1.1 1,535,274 + Pf6N2E2_1300 0.18 -0.0 1,535,274 + Pf6N2E2_1300 0.18 +0.7 1,535,274 + Pf6N2E2_1300 0.18 +0.1 1,535,275 - Pf6N2E2_1300 0.19 +0.6 1,535,467 + Pf6N2E2_1300 0.43 +0.3 1,535,779 + Pf6N2E2_1300 0.82 -0.6 1,535,830 + Pf6N2E2_1300 0.89 -0.7 1,535,830 + Pf6N2E2_1300 0.89 -0.5 1,535,830 + Pf6N2E2_1300 0.89 +0.3 1,535,830 + Pf6N2E2_1300 0.89 -0.2 1,535,830 + Pf6N2E2_1300 0.89 -0.3 1,535,830 + Pf6N2E2_1300 0.89 +0.9 1,535,830 + Pf6N2E2_1300 0.89 +0.2 1,535,831 - Pf6N2E2_1300 0.89 -1.1 1,536,111 + +0.6 1,536,112 - +0.7 1,536,112 - +0.5 1,536,405 + Pf6N2E2_1301 0.32 -0.9 1,536,405 + Pf6N2E2_1301 0.32 +0.0 1,536,406 - Pf6N2E2_1301 0.32 +0.5 1,536,421 - Pf6N2E2_1301 0.34 -0.5 1,536,492 + Pf6N2E2_1301 0.41 +0.9 1,536,492 + Pf6N2E2_1301 0.41 +1.1 1,536,619 + Pf6N2E2_1301 0.53 -1.8 1,536,619 + Pf6N2E2_1301 0.53 +1.0 1,536,619 + Pf6N2E2_1301 0.53 +0.5 1,536,619 + Pf6N2E2_1301 0.53 -0.3 1,536,620 - Pf6N2E2_1301 0.53 +0.8 1,536,620 - Pf6N2E2_1301 0.53 -1.0 1,536,778 - +1.9 1,536,778 - Pf6N2E2_1301 0.69 -0.7
Or see this region's nucleotide sequence