Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05203 and H281DRAFT_05204 are separated by 309 nucleotides H281DRAFT_05204 and H281DRAFT_05205 are separated by 248 nucleotides H281DRAFT_05205 and H281DRAFT_05206 are separated by 152 nucleotides
H281DRAFT_05203: H281DRAFT_05203 - Protein of unknown function (DUF2795), at 164,973 to 165,203
_05203
H281DRAFT_05204: H281DRAFT_05204 - hypothetical protein, at 165,513 to 165,767
_05204
H281DRAFT_05205: H281DRAFT_05205 - beta subunit of N-acylethanolamine-hydrolyzing acid amidase, at 166,016 to 167,353
_05205
H281DRAFT_05206: H281DRAFT_05206 - chloride channel protein, CIC family, at 167,506 to 169,329
_05206
Position (kb) 166
167
168 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 165.072 kb on + strand, within H281DRAFT_05203 at 165.289 kb on + strand at 165.290 kb on - strand at 165.418 kb on + strand at 165.581 kb on + strand, within H281DRAFT_05204 at 165.581 kb on + strand, within H281DRAFT_05204 at 165.582 kb on - strand, within H281DRAFT_05204 at 165.702 kb on - strand, within H281DRAFT_05204 at 165.779 kb on + strand at 166.006 kb on + strand at 166.007 kb on - strand at 166.007 kb on - strand at 166.067 kb on - strand at 166.067 kb on - strand at 166.067 kb on - strand at 166.315 kb on - strand, within H281DRAFT_05205 at 166.315 kb on - strand, within H281DRAFT_05205 at 166.315 kb on - strand, within H281DRAFT_05205 at 166.432 kb on + strand, within H281DRAFT_05205 at 166.433 kb on - strand, within H281DRAFT_05205 at 166.434 kb on + strand, within H281DRAFT_05205 at 166.434 kb on + strand, within H281DRAFT_05205 at 166.434 kb on + strand, within H281DRAFT_05205 at 166.503 kb on + strand, within H281DRAFT_05205 at 166.536 kb on + strand at 166.537 kb on - strand, within H281DRAFT_05205 at 166.687 kb on - strand, within H281DRAFT_05205 at 167.039 kb on + strand, within H281DRAFT_05205 at 167.049 kb on + strand, within H281DRAFT_05205 at 167.401 kb on + strand at 167.442 kb on - strand at 167.553 kb on + strand at 167.554 kb on - strand at 167.555 kb on + strand at 167.690 kb on + strand, within H281DRAFT_05206 at 167.795 kb on + strand, within H281DRAFT_05206 at 167.795 kb on + strand, within H281DRAFT_05206 at 167.801 kb on + strand, within H281DRAFT_05206 at 167.801 kb on + strand, within H281DRAFT_05206 at 167.824 kb on + strand, within H281DRAFT_05206 at 167.993 kb on + strand, within H281DRAFT_05206 at 167.993 kb on + strand, within H281DRAFT_05206
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 165,072 + H281DRAFT_05203 0.43 +0.9 165,289 + -2.4 165,290 - -2.2 165,418 + -1.5 165,581 + H281DRAFT_05204 0.27 -0.4 165,581 + H281DRAFT_05204 0.27 -1.2 165,582 - H281DRAFT_05204 0.27 +0.2 165,702 - H281DRAFT_05204 0.74 -1.4 165,779 + +0.3 166,006 + -0.4 166,007 - -0.3 166,007 - -0.9 166,067 - -1.3 166,067 - +3.2 166,067 - -0.3 166,315 - H281DRAFT_05205 0.22 -2.7 166,315 - H281DRAFT_05205 0.22 -0.2 166,315 - H281DRAFT_05205 0.22 +0.1 166,432 + H281DRAFT_05205 0.31 +0.1 166,433 - H281DRAFT_05205 0.31 +1.5 166,434 + H281DRAFT_05205 0.31 -0.1 166,434 + H281DRAFT_05205 0.31 -0.0 166,434 + H281DRAFT_05205 0.31 +0.2 166,503 + H281DRAFT_05205 0.36 +1.8 166,536 + -0.9 166,537 - H281DRAFT_05205 0.39 +0.2 166,687 - H281DRAFT_05205 0.50 -0.0 167,039 + H281DRAFT_05205 0.76 +1.1 167,049 + H281DRAFT_05205 0.77 +0.5 167,401 + +0.8 167,442 - -1.7 167,553 + -1.8 167,554 - +0.7 167,555 + +0.1 167,690 + H281DRAFT_05206 0.10 -1.4 167,795 + H281DRAFT_05206 0.16 -1.3 167,795 + H281DRAFT_05206 0.16 +0.6 167,801 + H281DRAFT_05206 0.16 -0.3 167,801 + H281DRAFT_05206 0.16 +0.1 167,824 + H281DRAFT_05206 0.17 +0.4 167,993 + H281DRAFT_05206 0.27 -0.3 167,993 + H281DRAFT_05206 0.27 -0.9
Or see this region's nucleotide sequence