Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04805 and H281DRAFT_04806 are separated by 287 nucleotides H281DRAFT_04806 and H281DRAFT_04807 are separated by 403 nucleotides H281DRAFT_04807 and H281DRAFT_04808 are separated by 52 nucleotides
H281DRAFT_04805: H281DRAFT_04805 - methyltransferase, FkbM family, at 239,230 to 240,135
_04805
H281DRAFT_04806: H281DRAFT_04806 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 240,423 to 241,955
_04806
H281DRAFT_04807: H281DRAFT_04807 - chaperonin GroES, at 242,359 to 242,649
_04807
H281DRAFT_04808: H281DRAFT_04808 - chaperonin GroEL, at 242,702 to 244,342
_04808
Position (kb) 240
241
242 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 239.526 kb on - strand, within H281DRAFT_04805 at 239.900 kb on + strand, within H281DRAFT_04805 at 240.086 kb on + strand at 240.112 kb on - strand at 240.294 kb on + strand at 240.356 kb on + strand at 240.357 kb on - strand at 240.357 kb on - strand at 240.357 kb on - strand at 240.358 kb on + strand at 240.731 kb on + strand, within H281DRAFT_04806 at 240.731 kb on + strand, within H281DRAFT_04806 at 240.732 kb on - strand, within H281DRAFT_04806 at 241.449 kb on + strand, within H281DRAFT_04806 at 241.450 kb on - strand, within H281DRAFT_04806 at 241.559 kb on + strand, within H281DRAFT_04806 at 241.559 kb on + strand, within H281DRAFT_04806 at 241.559 kb on + strand, within H281DRAFT_04806 at 241.560 kb on - strand, within H281DRAFT_04806 at 241.696 kb on + strand, within H281DRAFT_04806 at 241.792 kb on + strand, within H281DRAFT_04806 at 241.792 kb on + strand, within H281DRAFT_04806 at 241.793 kb on - strand, within H281DRAFT_04806 at 241.795 kb on + strand, within H281DRAFT_04806 at 241.796 kb on - strand, within H281DRAFT_04806 at 241.796 kb on - strand, within H281DRAFT_04806 at 241.876 kb on + strand at 241.886 kb on - strand at 241.995 kb on + strand at 241.997 kb on + strand at 241.997 kb on + strand at 241.997 kb on + strand at 242.044 kb on + strand at 242.044 kb on + strand at 242.044 kb on + strand at 242.045 kb on - strand at 242.045 kb on - strand at 242.048 kb on - strand at 242.176 kb on + strand at 242.176 kb on + strand at 242.177 kb on - strand at 242.181 kb on - strand at 242.204 kb on + strand at 242.204 kb on + strand at 242.205 kb on - strand at 242.205 kb on - strand at 242.205 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 239,526 - H281DRAFT_04805 0.33 +0.3 239,900 + H281DRAFT_04805 0.74 -1.8 240,086 + -1.2 240,112 - -2.2 240,294 + +1.3 240,356 + -0.9 240,357 - -1.0 240,357 - +1.0 240,357 - -0.9 240,358 + +0.0 240,731 + H281DRAFT_04806 0.20 +0.1 240,731 + H281DRAFT_04806 0.20 -2.0 240,732 - H281DRAFT_04806 0.20 -2.0 241,449 + H281DRAFT_04806 0.67 +1.2 241,450 - H281DRAFT_04806 0.67 -0.1 241,559 + H281DRAFT_04806 0.74 -0.7 241,559 + H281DRAFT_04806 0.74 +1.1 241,559 + H281DRAFT_04806 0.74 +1.9 241,560 - H281DRAFT_04806 0.74 +0.5 241,696 + H281DRAFT_04806 0.83 +1.0 241,792 + H281DRAFT_04806 0.89 -0.8 241,792 + H281DRAFT_04806 0.89 -1.1 241,793 - H281DRAFT_04806 0.89 -0.1 241,795 + H281DRAFT_04806 0.89 +0.0 241,796 - H281DRAFT_04806 0.90 -0.1 241,796 - H281DRAFT_04806 0.90 +0.7 241,876 + +0.9 241,886 - +0.4 241,995 + -0.4 241,997 + +0.3 241,997 + -0.1 241,997 + +0.4 242,044 + +0.1 242,044 + +1.4 242,044 + -0.1 242,045 - -0.5 242,045 - +0.7 242,048 - -0.1 242,176 + -0.6 242,176 + -0.3 242,177 - +0.1 242,181 - +0.3 242,204 + +1.0 242,204 + -0.3 242,205 - -2.8 242,205 - +0.5 242,205 - -0.4
Or see this region's nucleotide sequence