Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04045 and H281DRAFT_04046 overlap by 4 nucleotides H281DRAFT_04046 and H281DRAFT_04047 are separated by 7 nucleotides
H281DRAFT_04045: H281DRAFT_04045 - L-aminopeptidase DmpA. Serine peptidase. MEROPS family S58, at 144,635 to 145,747
_04045
H281DRAFT_04046: H281DRAFT_04046 - glutathione transport system permease protein, at 145,744 to 146,649
_04046
H281DRAFT_04047: H281DRAFT_04047 - glutathione transport system permease protein, at 146,657 to 147,577
_04047
Position (kb) 145
146
147 Strain fitness (log2 ratio) -2
-1
0
1 at 144.852 kb on + strand, within H281DRAFT_04045 at 144.852 kb on + strand, within H281DRAFT_04045 at 145.155 kb on + strand, within H281DRAFT_04045 at 145.156 kb on - strand, within H281DRAFT_04045 at 145.278 kb on + strand, within H281DRAFT_04045 at 145.279 kb on - strand, within H281DRAFT_04045 at 145.332 kb on + strand, within H281DRAFT_04045 at 145.450 kb on + strand, within H281DRAFT_04045 at 145.450 kb on + strand, within H281DRAFT_04045 at 145.607 kb on + strand, within H281DRAFT_04045 at 145.849 kb on - strand, within H281DRAFT_04046 at 145.986 kb on - strand, within H281DRAFT_04046 at 145.986 kb on - strand, within H281DRAFT_04046 at 146.019 kb on + strand, within H281DRAFT_04046 at 146.075 kb on + strand, within H281DRAFT_04046 at 146.075 kb on + strand, within H281DRAFT_04046 at 146.075 kb on + strand, within H281DRAFT_04046 at 146.075 kb on + strand, within H281DRAFT_04046 at 146.076 kb on - strand, within H281DRAFT_04046 at 146.076 kb on - strand, within H281DRAFT_04046 at 146.076 kb on - strand, within H281DRAFT_04046 at 146.101 kb on - strand, within H281DRAFT_04046 at 146.273 kb on + strand, within H281DRAFT_04046 at 146.273 kb on + strand, within H281DRAFT_04046 at 146.276 kb on + strand, within H281DRAFT_04046 at 146.277 kb on - strand, within H281DRAFT_04046 at 146.383 kb on - strand, within H281DRAFT_04046 at 146.448 kb on - strand, within H281DRAFT_04046 at 146.692 kb on - strand at 147.056 kb on + strand, within H281DRAFT_04047 at 147.057 kb on - strand, within H281DRAFT_04047 at 147.057 kb on - strand, within H281DRAFT_04047 at 147.057 kb on - strand at 147.060 kb on + strand, within H281DRAFT_04047 at 147.060 kb on + strand, within H281DRAFT_04047 at 147.060 kb on + strand, within H281DRAFT_04047 at 147.060 kb on + strand at 147.061 kb on - strand, within H281DRAFT_04047 at 147.620 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 144,852 + H281DRAFT_04045 0.19 +1.6 144,852 + H281DRAFT_04045 0.19 +0.0 145,155 + H281DRAFT_04045 0.47 +1.4 145,156 - H281DRAFT_04045 0.47 +0.2 145,278 + H281DRAFT_04045 0.58 -1.6 145,279 - H281DRAFT_04045 0.58 -0.5 145,332 + H281DRAFT_04045 0.63 +0.9 145,450 + H281DRAFT_04045 0.73 +0.6 145,450 + H281DRAFT_04045 0.73 -0.5 145,607 + H281DRAFT_04045 0.87 -0.5 145,849 - H281DRAFT_04046 0.12 +1.3 145,986 - H281DRAFT_04046 0.27 -0.6 145,986 - H281DRAFT_04046 0.27 +0.3 146,019 + H281DRAFT_04046 0.30 -0.7 146,075 + H281DRAFT_04046 0.37 +0.4 146,075 + H281DRAFT_04046 0.37 -0.1 146,075 + H281DRAFT_04046 0.37 +0.1 146,075 + H281DRAFT_04046 0.37 +0.5 146,076 - H281DRAFT_04046 0.37 +1.0 146,076 - H281DRAFT_04046 0.37 +0.8 146,076 - H281DRAFT_04046 0.37 -0.4 146,101 - H281DRAFT_04046 0.39 -0.8 146,273 + H281DRAFT_04046 0.58 -0.1 146,273 + H281DRAFT_04046 0.58 -0.6 146,276 + H281DRAFT_04046 0.59 -0.5 146,277 - H281DRAFT_04046 0.59 -0.6 146,383 - H281DRAFT_04046 0.71 -0.4 146,448 - H281DRAFT_04046 0.78 +0.3 146,692 - -0.4 147,056 + H281DRAFT_04047 0.43 +0.0 147,057 - H281DRAFT_04047 0.43 -0.0 147,057 - H281DRAFT_04047 0.43 +0.5 147,057 - +0.2 147,060 + H281DRAFT_04047 0.44 -0.7 147,060 + H281DRAFT_04047 0.44 -1.8 147,060 + H281DRAFT_04047 0.44 +0.5 147,060 + -2.2 147,061 - H281DRAFT_04047 0.44 -0.6 147,620 + +0.2
Or see this region's nucleotide sequence