Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03331 and H281DRAFT_03332 are separated by 134 nucleotides H281DRAFT_03332 and H281DRAFT_03333 are separated by 173 nucleotides H281DRAFT_03333 and H281DRAFT_03334 are separated by 93 nucleotides H281DRAFT_03334 and H281DRAFT_03335 are separated by 231 nucleotides
H281DRAFT_03331: H281DRAFT_03331 - membrane-associated protein, at 389,119 to 389,766
_03331
H281DRAFT_03332: H281DRAFT_03332 - Acetyltransferases, at 389,901 to 390,428
_03332
H281DRAFT_03333: H281DRAFT_03333 - hypothetical protein, at 390,602 to 391,663
_03333
H281DRAFT_03334: H281DRAFT_03334 - transcriptional regulator, ArsR family, at 391,757 to 392,047
_03334
H281DRAFT_03335: H281DRAFT_03335 - transcriptional regulator, LysR family, at 392,279 to 393,247
_03335
Position (kb) 390
391
392 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 389.681 kb on + strand, within H281DRAFT_03331 at 389.681 kb on + strand, within H281DRAFT_03331 at 389.692 kb on - strand, within H281DRAFT_03331 at 390.147 kb on + strand, within H281DRAFT_03332 at 390.166 kb on + strand, within H281DRAFT_03332 at 390.166 kb on + strand, within H281DRAFT_03332 at 390.166 kb on + strand, within H281DRAFT_03332 at 390.295 kb on - strand, within H281DRAFT_03332 at 390.322 kb on + strand, within H281DRAFT_03332 at 390.561 kb on + strand at 390.622 kb on + strand at 390.636 kb on + strand at 390.637 kb on - strand at 390.657 kb on + strand at 390.658 kb on - strand at 390.658 kb on - strand at 390.660 kb on + strand at 390.820 kb on - strand, within H281DRAFT_03333 at 390.992 kb on + strand, within H281DRAFT_03333 at 390.992 kb on + strand, within H281DRAFT_03333 at 391.080 kb on + strand, within H281DRAFT_03333 at 391.081 kb on - strand, within H281DRAFT_03333 at 391.081 kb on - strand, within H281DRAFT_03333 at 391.467 kb on + strand, within H281DRAFT_03333 at 391.537 kb on - strand, within H281DRAFT_03333 at 391.540 kb on - strand, within H281DRAFT_03333 at 391.934 kb on + strand, within H281DRAFT_03334 at 392.142 kb on + strand at 392.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 389,681 + H281DRAFT_03331 0.87 -1.1 389,681 + H281DRAFT_03331 0.87 -0.1 389,692 - H281DRAFT_03331 0.88 -0.2 390,147 + H281DRAFT_03332 0.47 -0.2 390,166 + H281DRAFT_03332 0.50 -0.1 390,166 + H281DRAFT_03332 0.50 +0.5 390,166 + H281DRAFT_03332 0.50 -2.9 390,295 - H281DRAFT_03332 0.75 -4.2 390,322 + H281DRAFT_03332 0.80 -3.1 390,561 + +1.1 390,622 + -2.2 390,636 + -0.1 390,637 - -0.3 390,657 + -1.2 390,658 - +1.7 390,658 - +1.3 390,660 + +0.5 390,820 - H281DRAFT_03333 0.21 +0.1 390,992 + H281DRAFT_03333 0.37 +0.7 390,992 + H281DRAFT_03333 0.37 -1.3 391,080 + H281DRAFT_03333 0.45 +2.1 391,081 - H281DRAFT_03333 0.45 +0.0 391,081 - H281DRAFT_03333 0.45 -0.3 391,467 + H281DRAFT_03333 0.81 +1.2 391,537 - H281DRAFT_03333 0.88 -0.3 391,540 - H281DRAFT_03333 0.88 +0.8 391,934 + H281DRAFT_03334 0.61 +1.5 392,142 + -1.5 392,218 - -2.3
Or see this region's nucleotide sequence