Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03039 and H281DRAFT_03040 are separated by 283 nucleotides H281DRAFT_03040 and H281DRAFT_03041 are separated by 23 nucleotides
H281DRAFT_03039: H281DRAFT_03039 - chemotaxis protein MotA, at 69,203 to 70,090
_03039
H281DRAFT_03040: H281DRAFT_03040 - Uncharacterized conserved protein, DUF2252 family, at 70,374 to 71,786
_03040
H281DRAFT_03041: H281DRAFT_03041 - Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family, at 71,810 to 72,664
_03041
Position (kb) 70
71
72 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 69.663 kb on - strand, within H281DRAFT_03039 at 69.706 kb on - strand, within H281DRAFT_03039 at 69.844 kb on - strand, within H281DRAFT_03039 at 69.986 kb on + strand, within H281DRAFT_03039 at 69.987 kb on - strand, within H281DRAFT_03039 at 70.177 kb on + strand at 70.236 kb on + strand at 70.308 kb on + strand at 70.309 kb on - strand at 70.309 kb on - strand at 70.373 kb on + strand at 70.448 kb on + strand at 70.487 kb on + strand at 70.490 kb on + strand at 70.490 kb on + strand at 70.536 kb on + strand, within H281DRAFT_03040 at 70.604 kb on - strand, within H281DRAFT_03040 at 70.604 kb on - strand, within H281DRAFT_03040 at 70.604 kb on - strand, within H281DRAFT_03040 at 70.870 kb on - strand, within H281DRAFT_03040 at 71.149 kb on + strand, within H281DRAFT_03040 at 71.173 kb on - strand, within H281DRAFT_03040 at 71.361 kb on + strand, within H281DRAFT_03040 at 71.476 kb on - strand, within H281DRAFT_03040 at 71.478 kb on + strand, within H281DRAFT_03040 at 71.478 kb on + strand, within H281DRAFT_03040 at 71.479 kb on - strand, within H281DRAFT_03040 at 71.626 kb on - strand, within H281DRAFT_03040 at 71.626 kb on - strand, within H281DRAFT_03040 at 71.627 kb on + strand, within H281DRAFT_03040 at 71.668 kb on - strand at 71.679 kb on + strand at 71.704 kb on - strand at 71.873 kb on + strand at 71.873 kb on + strand at 71.952 kb on - strand, within H281DRAFT_03041 at 72.045 kb on - strand, within H281DRAFT_03041 at 72.296 kb on + strand, within H281DRAFT_03041 at 72.310 kb on + strand, within H281DRAFT_03041 at 72.483 kb on - strand, within H281DRAFT_03041 at 72.664 kb on + strand at 72.665 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 69,663 - H281DRAFT_03039 0.52 -0.1 69,706 - H281DRAFT_03039 0.57 -0.1 69,844 - H281DRAFT_03039 0.72 +0.2 69,986 + H281DRAFT_03039 0.88 +0.0 69,987 - H281DRAFT_03039 0.88 +0.3 70,177 + -0.4 70,236 + +0.4 70,308 + +0.5 70,309 - -1.3 70,309 - +2.3 70,373 + -0.0 70,448 + -4.2 70,487 + +0.9 70,490 + +0.7 70,490 + +0.4 70,536 + H281DRAFT_03040 0.11 -2.2 70,604 - H281DRAFT_03040 0.16 -0.2 70,604 - H281DRAFT_03040 0.16 +0.6 70,604 - H281DRAFT_03040 0.16 -0.2 70,870 - H281DRAFT_03040 0.35 -2.5 71,149 + H281DRAFT_03040 0.55 +0.2 71,173 - H281DRAFT_03040 0.57 -0.1 71,361 + H281DRAFT_03040 0.70 -1.1 71,476 - H281DRAFT_03040 0.78 -0.2 71,478 + H281DRAFT_03040 0.78 -0.3 71,478 + H281DRAFT_03040 0.78 +0.6 71,479 - H281DRAFT_03040 0.78 +0.3 71,626 - H281DRAFT_03040 0.89 +0.3 71,626 - H281DRAFT_03040 0.89 -0.1 71,627 + H281DRAFT_03040 0.89 +0.4 71,668 - -0.7 71,679 + -0.5 71,704 - -1.1 71,873 + -1.0 71,873 + +0.4 71,952 - H281DRAFT_03041 0.17 -2.1 72,045 - H281DRAFT_03041 0.27 -1.4 72,296 + H281DRAFT_03041 0.57 -0.1 72,310 + H281DRAFT_03041 0.58 -0.2 72,483 - H281DRAFT_03041 0.79 +0.1 72,664 + -0.4 72,665 - +0.0
Or see this region's nucleotide sequence