Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03014 and H281DRAFT_03015 are separated by 33 nucleotides H281DRAFT_03015 and H281DRAFT_03016 are separated by 90 nucleotides
H281DRAFT_03014: H281DRAFT_03014 - MFS transporter, OFA family, oxalate/formate antiporter, at 41,398 to 42,744
_03014
H281DRAFT_03015: H281DRAFT_03015 - transcriptional regulator, LysR family, at 42,778 to 43,818
_03015
H281DRAFT_03016: H281DRAFT_03016 - aldehyde dehydrogenase (acceptor), at 43,909 to 45,360
_03016
Position (kb) 42
43
44 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 42.086 kb on - strand, within H281DRAFT_03014 at 42.234 kb on + strand, within H281DRAFT_03014 at 42.234 kb on + strand, within H281DRAFT_03014 at 42.315 kb on + strand, within H281DRAFT_03014 at 42.352 kb on + strand, within H281DRAFT_03014 at 42.463 kb on + strand, within H281DRAFT_03014 at 42.491 kb on - strand, within H281DRAFT_03014 at 42.589 kb on - strand, within H281DRAFT_03014 at 43.665 kb on - strand, within H281DRAFT_03015 at 43.674 kb on + strand, within H281DRAFT_03015 at 43.995 kb on + strand at 43.996 kb on - strand at 44.263 kb on + strand, within H281DRAFT_03016 at 44.264 kb on - strand, within H281DRAFT_03016 at 44.328 kb on + strand, within H281DRAFT_03016 at 44.328 kb on + strand, within H281DRAFT_03016 at 44.329 kb on - strand, within H281DRAFT_03016 at 44.329 kb on - strand, within H281DRAFT_03016 at 44.526 kb on + strand, within H281DRAFT_03016 at 44.810 kb on - strand, within H281DRAFT_03016
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 42,086 - H281DRAFT_03014 0.51 -0.6 42,234 + H281DRAFT_03014 0.62 -0.8 42,234 + H281DRAFT_03014 0.62 -0.2 42,315 + H281DRAFT_03014 0.68 -0.4 42,352 + H281DRAFT_03014 0.71 -0.4 42,463 + H281DRAFT_03014 0.79 +0.7 42,491 - H281DRAFT_03014 0.81 +0.2 42,589 - H281DRAFT_03014 0.88 -3.3 43,665 - H281DRAFT_03015 0.85 -0.6 43,674 + H281DRAFT_03015 0.86 +0.1 43,995 + +0.6 43,996 - +1.0 44,263 + H281DRAFT_03016 0.24 -0.8 44,264 - H281DRAFT_03016 0.24 +0.0 44,328 + H281DRAFT_03016 0.29 -0.4 44,328 + H281DRAFT_03016 0.29 -1.9 44,329 - H281DRAFT_03016 0.29 +0.1 44,329 - H281DRAFT_03016 0.29 -0.1 44,526 + H281DRAFT_03016 0.42 +1.7 44,810 - H281DRAFT_03016 0.62 +0.2
Or see this region's nucleotide sequence