Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01354 and H281DRAFT_01355 are separated by 142 nucleotides H281DRAFT_01355 and H281DRAFT_01356 are separated by 23 nucleotides H281DRAFT_01356 and H281DRAFT_01357 are separated by 168 nucleotides
H281DRAFT_01354: H281DRAFT_01354 - DNA-binding transcriptional regulator, LysR family, at 197,431 to 198,357
_01354
H281DRAFT_01355: H281DRAFT_01355 - Predicted arabinose efflux permease, MFS family, at 198,500 to 199,750
_01355
H281DRAFT_01356: H281DRAFT_01356 - uncharacterized peroxidase-related enzyme, at 199,774 to 200,391
_01356
H281DRAFT_01357: H281DRAFT_01357 - transcriptional regulator, LysR family, at 200,560 to 201,522
_01357
Position (kb) 198
199
200 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 197.948 kb on - strand, within H281DRAFT_01354 at 198.330 kb on - strand at 198.362 kb on + strand at 198.621 kb on + strand at 199.198 kb on + strand, within H281DRAFT_01355 at 199.244 kb on + strand, within H281DRAFT_01355 at 199.245 kb on - strand, within H281DRAFT_01355 at 199.365 kb on - strand, within H281DRAFT_01355 at 199.382 kb on + strand, within H281DRAFT_01355 at 199.382 kb on + strand, within H281DRAFT_01355 at 199.449 kb on + strand, within H281DRAFT_01355 at 199.657 kb on - strand at 199.760 kb on - strand at 199.836 kb on - strand, within H281DRAFT_01356 at 199.903 kb on - strand, within H281DRAFT_01356 at 200.133 kb on - strand, within H281DRAFT_01356 at 200.225 kb on + strand, within H281DRAFT_01356 at 200.225 kb on + strand, within H281DRAFT_01356 at 200.306 kb on - strand, within H281DRAFT_01356 at 200.394 kb on + strand at 200.416 kb on - strand at 200.431 kb on + strand at 200.447 kb on + strand at 200.708 kb on + strand, within H281DRAFT_01357 at 200.747 kb on + strand, within H281DRAFT_01357
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 197,948 - H281DRAFT_01354 0.56 -0.5 198,330 - -0.1 198,362 + -0.2 198,621 + -0.3 199,198 + H281DRAFT_01355 0.56 -1.7 199,244 + H281DRAFT_01355 0.59 +0.3 199,245 - H281DRAFT_01355 0.60 +1.3 199,365 - H281DRAFT_01355 0.69 +0.7 199,382 + H281DRAFT_01355 0.71 -0.3 199,382 + H281DRAFT_01355 0.71 +0.7 199,449 + H281DRAFT_01355 0.76 +0.1 199,657 - +0.2 199,760 - +0.5 199,836 - H281DRAFT_01356 0.10 -1.1 199,903 - H281DRAFT_01356 0.21 +0.8 200,133 - H281DRAFT_01356 0.58 -0.0 200,225 + H281DRAFT_01356 0.73 +4.1 200,225 + H281DRAFT_01356 0.73 -0.3 200,306 - H281DRAFT_01356 0.86 -0.4 200,394 + +0.6 200,416 - -0.5 200,431 + -0.4 200,447 + +1.1 200,708 + H281DRAFT_01357 0.15 +0.2 200,747 + H281DRAFT_01357 0.19 -0.4
Or see this region's nucleotide sequence