Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01112 and H281DRAFT_01113 are separated by 15 nucleotides H281DRAFT_01113 and H281DRAFT_01114 are separated by 60 nucleotides
H281DRAFT_01112: H281DRAFT_01112 - deoxynucleoside transporter, permease component 2 <small>(from data)</small>, at 1,251,300 to 1,252,394
_01112
H281DRAFT_01113: H281DRAFT_01113 - deoxynucleoside transporter, ATPase component <small>(from data)</small>, at 1,252,410 to 1,253,957
_01113
H281DRAFT_01114: H281DRAFT_01114 - deoxynucleoside transporter, substrate-binding component <small>(from data)</small>, at 1,254,018 to 1,255,022
_01114
Position (kb) 1252
1253
1254 Strain fitness (log2 ratio) -2
-1
0
1 at 1251.433 kb on - strand, within H281DRAFT_01112 at 1251.674 kb on - strand, within H281DRAFT_01112 at 1251.788 kb on - strand, within H281DRAFT_01112 at 1252.045 kb on + strand, within H281DRAFT_01112 at 1253.397 kb on - strand, within H281DRAFT_01113 at 1253.875 kb on - strand at 1253.875 kb on - strand at 1254.037 kb on + strand at 1254.038 kb on - strand at 1254.038 kb on - strand at 1254.479 kb on - strand, within H281DRAFT_01114
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 1,251,433 - H281DRAFT_01112 0.12 -2.6 1,251,674 - H281DRAFT_01112 0.34 +0.6 1,251,788 - H281DRAFT_01112 0.45 -0.7 1,252,045 + H281DRAFT_01112 0.68 +0.4 1,253,397 - H281DRAFT_01113 0.64 +0.8 1,253,875 - +0.1 1,253,875 - -2.5 1,254,037 + +0.3 1,254,038 - +0.4 1,254,038 - -0.1 1,254,479 - H281DRAFT_01114 0.46 +0.3
Or see this region's nucleotide sequence