Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00493 and H281DRAFT_00494 are separated by 321 nucleotides H281DRAFT_00494 and H281DRAFT_00495 are separated by 121 nucleotides
H281DRAFT_00493: H281DRAFT_00493 - competence protein ComEC, at 552,394 to 555,198
_00493
H281DRAFT_00494: H281DRAFT_00494 - Pimeloyl-ACP methyl ester carboxylesterase, at 555,520 to 556,239
_00494
H281DRAFT_00495: H281DRAFT_00495 - CTP synthase, at 556,361 to 558,034
_00495
Position (kb) 555
556
557 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 554.555 kb on + strand at 554.745 kb on + strand at 554.745 kb on + strand, within H281DRAFT_00493 at 554.746 kb on - strand, within H281DRAFT_00493 at 554.955 kb on + strand at 554.955 kb on + strand at 554.956 kb on - strand at 554.956 kb on - strand at 554.984 kb on + strand at 554.985 kb on - strand at 554.990 kb on - strand at 555.034 kb on + strand at 555.048 kb on + strand at 555.519 kb on + strand at 555.626 kb on - strand, within H281DRAFT_00494 at 555.668 kb on - strand, within H281DRAFT_00494 at 555.668 kb on - strand, within H281DRAFT_00494 at 555.919 kb on + strand, within H281DRAFT_00494 at 555.920 kb on - strand, within H281DRAFT_00494 at 555.920 kb on - strand, within H281DRAFT_00494 at 556.001 kb on - strand, within H281DRAFT_00494 at 556.001 kb on - strand, within H281DRAFT_00494 at 556.017 kb on + strand, within H281DRAFT_00494 at 556.018 kb on - strand, within H281DRAFT_00494 at 556.325 kb on + strand at 556.325 kb on + strand at 556.325 kb on + strand at 556.395 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 554,555 + -1.9 554,745 + +0.6 554,745 + H281DRAFT_00493 0.84 -0.7 554,746 - H281DRAFT_00493 0.84 +0.5 554,955 + -2.2 554,955 + +1.0 554,956 - -1.0 554,956 - +0.8 554,984 + +0.4 554,985 - +1.4 554,990 - -1.0 555,034 + -1.4 555,048 + +0.1 555,519 + -0.8 555,626 - H281DRAFT_00494 0.15 -2.4 555,668 - H281DRAFT_00494 0.21 +0.3 555,668 - H281DRAFT_00494 0.21 -0.5 555,919 + H281DRAFT_00494 0.55 -0.5 555,920 - H281DRAFT_00494 0.56 -1.1 555,920 - H281DRAFT_00494 0.56 -1.9 556,001 - H281DRAFT_00494 0.67 -0.0 556,001 - H281DRAFT_00494 0.67 +0.6 556,017 + H281DRAFT_00494 0.69 -0.3 556,018 - H281DRAFT_00494 0.69 +0.5 556,325 + +0.3 556,325 + +4.7 556,325 + -0.5 556,395 + +0.4
Or see this region's nucleotide sequence