Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00407 and H281DRAFT_00408 are separated by 109 nucleotides H281DRAFT_00408 and H281DRAFT_00409 are separated by 83 nucleotides H281DRAFT_00409 and H281DRAFT_00410 overlap by 41 nucleotides H281DRAFT_00410 and H281DRAFT_00411 overlap by 1 nucleotides H281DRAFT_00411 and H281DRAFT_00412 are separated by 13 nucleotides
H281DRAFT_00407: H281DRAFT_00407 - Protein of unknown function (DUF1328), at 451,174 to 451,350
_00407
H281DRAFT_00408: H281DRAFT_00408 - Protein of unknown function (DUF1328), at 451,460 to 451,621
_00408
H281DRAFT_00409: H281DRAFT_00409 - bacterioferritin, at 451,705 to 452,277
_00409
H281DRAFT_00410: H281DRAFT_00410 - two component transcriptional regulator, LuxR family, at 452,237 to 453,028
_00410
H281DRAFT_00411: H281DRAFT_00411 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 453,028 to 453,477
_00411
H281DRAFT_00412: H281DRAFT_00412 - Predicted arabinose efflux permease, MFS family, at 453,491 to 454,861
_00412
Position (kb) 452
453
454 Strain fitness (log2 ratio) -2
-1
0
1 at 451.470 kb on - strand at 451.557 kb on + strand, within H281DRAFT_00408 at 451.565 kb on + strand, within H281DRAFT_00408 at 451.903 kb on + strand, within H281DRAFT_00409 at 452.153 kb on - strand, within H281DRAFT_00409 at 452.351 kb on - strand, within H281DRAFT_00410 at 452.413 kb on - strand, within H281DRAFT_00410 at 452.661 kb on - strand, within H281DRAFT_00410 at 452.765 kb on + strand, within H281DRAFT_00410 at 452.943 kb on - strand, within H281DRAFT_00410 at 452.943 kb on - strand, within H281DRAFT_00410 at 452.944 kb on + strand, within H281DRAFT_00410 at 452.997 kb on - strand at 452.999 kb on + strand at 452.999 kb on + strand at 453.403 kb on + strand, within H281DRAFT_00411 at 453.639 kb on + strand, within H281DRAFT_00412 at 453.640 kb on - strand, within H281DRAFT_00412 at 453.651 kb on + strand, within H281DRAFT_00412 at 453.652 kb on - strand, within H281DRAFT_00412 at 454.005 kb on - strand, within H281DRAFT_00412
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 451,470 - -2.3 451,557 + H281DRAFT_00408 0.60 -0.1 451,565 + H281DRAFT_00408 0.65 -0.0 451,903 + H281DRAFT_00409 0.35 -1.1 452,153 - H281DRAFT_00409 0.78 -0.7 452,351 - H281DRAFT_00410 0.14 -0.6 452,413 - H281DRAFT_00410 0.22 -0.5 452,661 - H281DRAFT_00410 0.54 -0.4 452,765 + H281DRAFT_00410 0.67 -0.7 452,943 - H281DRAFT_00410 0.89 +0.1 452,943 - H281DRAFT_00410 0.89 -0.2 452,944 + H281DRAFT_00410 0.89 -0.9 452,997 - +0.5 452,999 + +0.1 452,999 + -0.4 453,403 + H281DRAFT_00411 0.83 -1.1 453,639 + H281DRAFT_00412 0.11 +0.2 453,640 - H281DRAFT_00412 0.11 -0.2 453,651 + H281DRAFT_00412 0.12 -0.3 453,652 - H281DRAFT_00412 0.12 +1.3 454,005 - H281DRAFT_00412 0.37 -0.4
Or see this region's nucleotide sequence