Experiment: butyrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00061 and H281DRAFT_00062 are separated by 186 nucleotides H281DRAFT_00062 and H281DRAFT_00063 are separated by 80 nucleotides H281DRAFT_00063 and H281DRAFT_00064 are separated by 135 nucleotides H281DRAFT_00064 and H281DRAFT_00065 are separated by 24 nucleotides H281DRAFT_00065 and H281DRAFT_00066 are separated by 77 nucleotides
H281DRAFT_00061: H281DRAFT_00061 - hypothetical protein, at 64,515 to 64,772
_00061
H281DRAFT_00062: H281DRAFT_00062 - hypothetical protein, at 64,959 to 65,171
_00062
H281DRAFT_00063: H281DRAFT_00063 - hypothetical protein, at 65,252 to 65,557
_00063
H281DRAFT_00064: H281DRAFT_00064 - hypothetical protein, at 65,693 to 66,235
_00064
H281DRAFT_00065: H281DRAFT_00065 - hypothetical protein, at 66,260 to 66,358
_00065
H281DRAFT_00066: H281DRAFT_00066 - hypothetical protein, at 66,436 to 67,059
_00066
Position (kb) 65
66
67 Strain fitness (log2 ratio) -2
-1
0
1 at 64.784 kb on - strand at 64.942 kb on + strand at 64.943 kb on - strand at 64.965 kb on - strand at 65.000 kb on + strand, within H281DRAFT_00062 at 65.019 kb on + strand, within H281DRAFT_00062 at 65.200 kb on - strand at 65.229 kb on + strand at 65.229 kb on + strand at 65.287 kb on - strand, within H281DRAFT_00063 at 65.305 kb on + strand, within H281DRAFT_00063 at 65.307 kb on + strand, within H281DRAFT_00063 at 65.312 kb on + strand, within H281DRAFT_00063 at 65.313 kb on - strand, within H281DRAFT_00063 at 65.313 kb on - strand, within H281DRAFT_00063 at 65.313 kb on - strand, within H281DRAFT_00063 at 65.313 kb on - strand, within H281DRAFT_00063 at 65.316 kb on + strand, within H281DRAFT_00063 at 65.319 kb on - strand, within H281DRAFT_00063 at 65.439 kb on + strand, within H281DRAFT_00063 at 65.441 kb on + strand, within H281DRAFT_00063 at 65.442 kb on - strand at 65.442 kb on - strand, within H281DRAFT_00063 at 65.494 kb on - strand, within H281DRAFT_00063 at 65.585 kb on + strand at 65.586 kb on - strand at 65.586 kb on - strand at 65.590 kb on - strand at 65.644 kb on + strand at 65.677 kb on + strand at 65.678 kb on - strand at 65.745 kb on - strand at 65.859 kb on - strand, within H281DRAFT_00064 at 65.920 kb on + strand, within H281DRAFT_00064 at 65.973 kb on + strand, within H281DRAFT_00064 at 65.997 kb on + strand, within H281DRAFT_00064 at 66.240 kb on + strand at 66.273 kb on - strand, within H281DRAFT_00065 at 66.356 kb on + strand at 66.356 kb on + strand at 66.867 kb on + strand, within H281DRAFT_00066 at 66.985 kb on + strand, within H281DRAFT_00066 at 67.058 kb on - strand at 67.206 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction butyrate (C) remove 64,784 - +0.6 64,942 + +0.4 64,943 - -0.9 64,965 - +0.4 65,000 + H281DRAFT_00062 0.19 -1.9 65,019 + H281DRAFT_00062 0.28 -1.8 65,200 - +0.3 65,229 + -2.5 65,229 + -0.9 65,287 - H281DRAFT_00063 0.11 +0.1 65,305 + H281DRAFT_00063 0.17 +1.1 65,307 + H281DRAFT_00063 0.18 -0.6 65,312 + H281DRAFT_00063 0.20 +0.5 65,313 - H281DRAFT_00063 0.20 +0.4 65,313 - H281DRAFT_00063 0.20 -2.5 65,313 - H281DRAFT_00063 0.20 -0.9 65,313 - H281DRAFT_00063 0.20 +0.5 65,316 + H281DRAFT_00063 0.21 +0.6 65,319 - H281DRAFT_00063 0.22 +0.1 65,439 + H281DRAFT_00063 0.61 -1.6 65,441 + H281DRAFT_00063 0.62 -0.1 65,442 - -1.9 65,442 - H281DRAFT_00063 0.62 +0.3 65,494 - H281DRAFT_00063 0.79 -0.7 65,585 + -0.7 65,586 - +0.2 65,586 - -0.2 65,590 - -1.5 65,644 + -0.7 65,677 + +0.1 65,678 - +0.3 65,745 - +0.3 65,859 - H281DRAFT_00064 0.31 +1.7 65,920 + H281DRAFT_00064 0.42 -0.1 65,973 + H281DRAFT_00064 0.52 -0.9 65,997 + H281DRAFT_00064 0.56 -1.9 66,240 + +0.2 66,273 - H281DRAFT_00065 0.13 -0.6 66,356 + -0.2 66,356 + -1.2 66,867 + H281DRAFT_00066 0.69 -0.2 66,985 + H281DRAFT_00066 0.88 -1.0 67,058 - +0.8 67,206 + -0.7
Or see this region's nucleotide sequence