Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4219 and Ga0059261_4220 are separated by 52 nucleotides Ga0059261_4220 and Ga0059261_4221 are separated by 36 nucleotides Ga0059261_4221 and Ga0059261_4222 overlap by 4 nucleotides Ga0059261_4222 and Ga0059261_4223 are separated by 85 nucleotides
Ga0059261_4219: Ga0059261_4219 - Nucleoside-diphosphate-sugar epimerases, at 4,372,985 to 4,373,938
_4219
Ga0059261_4220: Ga0059261_4220 - Uncharacterized protein conserved in bacteria, at 4,373,991 to 4,374,653
_4220
Ga0059261_4221: Ga0059261_4221 - Transcriptional regulators, at 4,374,690 to 4,375,172
_4221
Ga0059261_4222: Ga0059261_4222 - Enoyl-CoA hydratase/carnithine racemase, at 4,375,169 to 4,375,933
_4222
Ga0059261_4223: Ga0059261_4223 - 3-isopropylmalate dehydratase, large subunit, at 4,376,019 to 4,377,455
_4223
Position (kb) 4374
4375
4376 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 4373.729 kb on + strand, within Ga0059261_4219 at 4373.729 kb on + strand, within Ga0059261_4219 at 4373.753 kb on + strand, within Ga0059261_4219 at 4373.753 kb on + strand, within Ga0059261_4219 at 4373.754 kb on - strand, within Ga0059261_4219 at 4373.798 kb on + strand, within Ga0059261_4219 at 4373.798 kb on + strand, within Ga0059261_4219 at 4373.799 kb on - strand, within Ga0059261_4219 at 4373.912 kb on + strand at 4373.912 kb on + strand at 4373.912 kb on + strand at 4373.912 kb on + strand at 4373.912 kb on + strand at 4373.912 kb on + strand at 4373.913 kb on - strand at 4373.913 kb on - strand at 4373.913 kb on - strand at 4373.913 kb on - strand at 4373.913 kb on - strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.914 kb on + strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.915 kb on - strand at 4373.959 kb on + strand at 4373.959 kb on + strand at 4373.959 kb on + strand at 4373.960 kb on - strand at 4373.960 kb on - strand at 4373.979 kb on + strand at 4373.979 kb on + strand at 4373.980 kb on - strand at 4374.015 kb on + strand at 4374.016 kb on - strand at 4374.037 kb on + strand at 4374.037 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.039 kb on + strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.040 kb on - strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.045 kb on + strand at 4374.046 kb on - strand at 4374.046 kb on - strand at 4374.046 kb on - strand at 4374.046 kb on - strand at 4374.047 kb on + strand at 4374.047 kb on + strand at 4374.064 kb on - strand, within Ga0059261_4220 at 4374.082 kb on + strand, within Ga0059261_4220 at 4374.083 kb on - strand, within Ga0059261_4220 at 4374.166 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.168 kb on + strand at 4374.168 kb on + strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.169 kb on - strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand at 4374.170 kb on + strand at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.170 kb on + strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.171 kb on - strand, within Ga0059261_4220 at 4374.239 kb on + strand, within Ga0059261_4220 at 4374.290 kb on + strand, within Ga0059261_4220 at 4374.290 kb on + strand, within Ga0059261_4220 at 4374.290 kb on + strand, within Ga0059261_4220 at 4374.291 kb on - strand, within Ga0059261_4220 at 4374.291 kb on - strand, within Ga0059261_4220 at 4374.474 kb on + strand, within Ga0059261_4220 at 4374.474 kb on + strand, within Ga0059261_4220 at 4374.670 kb on - strand at 4374.687 kb on + strand at 4374.689 kb on + strand at 4374.698 kb on + strand at 4374.723 kb on - strand at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.262 kb on + strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.263 kb on - strand, within Ga0059261_4222 at 4375.285 kb on - strand, within Ga0059261_4222 at 4375.479 kb on + strand, within Ga0059261_4222 at 4375.489 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.514 kb on + strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.515 kb on - strand, within Ga0059261_4222 at 4375.857 kb on + strand at 4375.857 kb on + strand at 4375.857 kb on + strand at 4375.858 kb on - strand at 4375.858 kb on - strand at 4375.858 kb on - strand at 4376.004 kb on + strand at 4376.004 kb on + strand at 4376.004 kb on + strand at 4376.005 kb on - strand at 4376.005 kb on - strand at 4376.043 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.103 kb on + strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.104 kb on - strand at 4376.106 kb on - strand at 4376.106 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,373,729 + Ga0059261_4219 0.78 +0.4 4,373,729 + Ga0059261_4219 0.78 -0.3 4,373,753 + Ga0059261_4219 0.81 -0.1 4,373,753 + Ga0059261_4219 0.81 -0.4 4,373,754 - Ga0059261_4219 0.81 -0.1 4,373,798 + Ga0059261_4219 0.85 -0.7 4,373,798 + Ga0059261_4219 0.85 +0.9 4,373,799 - Ga0059261_4219 0.85 -1.6 4,373,912 + +0.2 4,373,912 + +0.3 4,373,912 + -0.4 4,373,912 + +1.1 4,373,912 + +0.4 4,373,912 + +1.5 4,373,913 - +1.7 4,373,913 - -0.3 4,373,913 - +0.3 4,373,913 - +0.4 4,373,913 - -0.4 4,373,914 + -0.7 4,373,914 + -0.7 4,373,914 + +0.1 4,373,914 + +0.1 4,373,914 + -0.4 4,373,914 + -0.3 4,373,914 + +0.5 4,373,915 - +0.2 4,373,915 - -1.2 4,373,915 - -1.1 4,373,915 - -1.1 4,373,915 - +0.4 4,373,915 - +0.2 4,373,915 - +0.7 4,373,915 - -0.1 4,373,915 - +0.4 4,373,915 - -0.1 4,373,915 - +1.8 4,373,959 + -0.7 4,373,959 + +2.1 4,373,959 + -0.5 4,373,960 - +0.1 4,373,960 - +0.5 4,373,979 + -0.3 4,373,979 + -0.2 4,373,980 - -0.2 4,374,015 + -1.3 4,374,016 - +0.2 4,374,037 + +0.3 4,374,037 + -0.4 4,374,039 + +1.8 4,374,039 + -0.5 4,374,039 + -0.4 4,374,039 + -0.9 4,374,039 + -0.7 4,374,039 + +0.3 4,374,039 + -0.6 4,374,039 + -0.8 4,374,039 + -0.2 4,374,039 + -0.3 4,374,039 + -0.1 4,374,039 + -0.9 4,374,039 + +0.0 4,374,039 + +0.3 4,374,039 + +0.3 4,374,039 + +1.3 4,374,039 + -0.2 4,374,039 + +0.3 4,374,040 - +0.8 4,374,040 - -0.2 4,374,040 - +1.0 4,374,040 - +0.5 4,374,040 - -0.1 4,374,040 - +0.5 4,374,040 - +1.6 4,374,040 - +0.3 4,374,040 - +0.5 4,374,040 - -1.7 4,374,040 - -0.1 4,374,040 - -0.3 4,374,040 - +0.3 4,374,040 - -1.3 4,374,040 - +0.5 4,374,040 - +0.2 4,374,040 - -0.7 4,374,040 - +0.6 4,374,045 + -0.4 4,374,045 + -0.3 4,374,045 + -0.7 4,374,045 + +0.1 4,374,045 + -0.3 4,374,045 + -0.5 4,374,045 + +1.1 4,374,045 + +0.7 4,374,045 + -0.6 4,374,045 + -0.9 4,374,045 + -1.2 4,374,045 + +4.4 4,374,045 + -0.3 4,374,045 + -0.9 4,374,045 + +1.1 4,374,046 - -0.3 4,374,046 - -0.4 4,374,046 - -0.1 4,374,046 - +1.1 4,374,047 + +0.3 4,374,047 + -0.7 4,374,064 - Ga0059261_4220 0.11 +0.3 4,374,082 + Ga0059261_4220 0.14 +0.2 4,374,083 - Ga0059261_4220 0.14 +1.0 4,374,166 + Ga0059261_4220 0.26 -0.4 4,374,168 + Ga0059261_4220 0.27 +0.9 4,374,168 + +1.5 4,374,168 + Ga0059261_4220 0.27 +0.6 4,374,168 + Ga0059261_4220 0.27 -1.4 4,374,168 + Ga0059261_4220 0.27 +0.5 4,374,168 + Ga0059261_4220 0.27 -0.2 4,374,168 + +0.5 4,374,168 + Ga0059261_4220 0.27 -0.1 4,374,168 + +0.5 4,374,168 + Ga0059261_4220 0.27 +0.2 4,374,169 - Ga0059261_4220 0.27 +1.1 4,374,169 - Ga0059261_4220 0.27 -0.6 4,374,169 - Ga0059261_4220 0.27 -0.3 4,374,169 - Ga0059261_4220 0.27 +0.1 4,374,169 - -0.7 4,374,169 - Ga0059261_4220 0.27 +0.2 4,374,169 - Ga0059261_4220 0.27 +2.5 4,374,169 - Ga0059261_4220 0.27 +0.1 4,374,170 + Ga0059261_4220 0.27 +0.3 4,374,170 + Ga0059261_4220 0.27 -0.1 4,374,170 + Ga0059261_4220 0.27 -1.7 4,374,170 + Ga0059261_4220 0.27 -0.8 4,374,170 + Ga0059261_4220 0.27 -0.4 4,374,170 + Ga0059261_4220 0.27 +0.0 4,374,170 + +0.3 4,374,170 + -0.9 4,374,170 + Ga0059261_4220 0.27 -0.2 4,374,170 + Ga0059261_4220 0.27 -0.6 4,374,170 + Ga0059261_4220 0.27 -0.5 4,374,170 + Ga0059261_4220 0.27 +1.2 4,374,170 + Ga0059261_4220 0.27 +1.2 4,374,170 + Ga0059261_4220 0.27 -0.2 4,374,171 - Ga0059261_4220 0.27 +0.3 4,374,171 - Ga0059261_4220 0.27 +0.2 4,374,171 - Ga0059261_4220 0.27 +0.1 4,374,171 - Ga0059261_4220 0.27 +0.6 4,374,171 - Ga0059261_4220 0.27 -0.2 4,374,171 - Ga0059261_4220 0.27 -1.8 4,374,171 - Ga0059261_4220 0.27 -0.3 4,374,171 - Ga0059261_4220 0.27 +1.3 4,374,171 - Ga0059261_4220 0.27 +0.2 4,374,171 - Ga0059261_4220 0.27 +0.3 4,374,171 - Ga0059261_4220 0.27 -1.3 4,374,171 - Ga0059261_4220 0.27 -0.3 4,374,171 - Ga0059261_4220 0.27 +0.3 4,374,171 - Ga0059261_4220 0.27 -0.4 4,374,239 + Ga0059261_4220 0.37 -0.4 4,374,290 + Ga0059261_4220 0.45 +0.6 4,374,290 + Ga0059261_4220 0.45 +0.5 4,374,290 + Ga0059261_4220 0.45 -1.0 4,374,291 - Ga0059261_4220 0.45 -0.4 4,374,291 - Ga0059261_4220 0.45 +0.3 4,374,474 + Ga0059261_4220 0.73 -0.1 4,374,474 + Ga0059261_4220 0.73 -0.4 4,374,670 - +0.1 4,374,687 + -1.0 4,374,689 + +2.6 4,374,698 + +0.1 4,374,723 - -0.7 4,375,262 + Ga0059261_4222 0.12 +1.1 4,375,262 + Ga0059261_4222 0.12 -0.2 4,375,262 + Ga0059261_4222 0.12 +0.6 4,375,262 + Ga0059261_4222 0.12 -1.1 4,375,262 + Ga0059261_4222 0.12 -0.2 4,375,263 - Ga0059261_4222 0.12 -0.0 4,375,263 - Ga0059261_4222 0.12 -0.6 4,375,263 - Ga0059261_4222 0.12 -1.2 4,375,263 - Ga0059261_4222 0.12 -1.6 4,375,263 - Ga0059261_4222 0.12 +0.1 4,375,285 - Ga0059261_4222 0.15 +0.1 4,375,479 + Ga0059261_4222 0.41 +0.3 4,375,489 + Ga0059261_4222 0.42 -0.8 4,375,514 + Ga0059261_4222 0.45 -0.5 4,375,514 + Ga0059261_4222 0.45 -0.4 4,375,514 + Ga0059261_4222 0.45 -0.4 4,375,515 - Ga0059261_4222 0.45 +0.4 4,375,515 - Ga0059261_4222 0.45 -0.1 4,375,515 - Ga0059261_4222 0.45 -0.5 4,375,515 - Ga0059261_4222 0.45 -1.1 4,375,515 - Ga0059261_4222 0.45 +0.8 4,375,857 + -0.2 4,375,857 + +0.3 4,375,857 + +0.1 4,375,858 - -1.1 4,375,858 - -0.1 4,375,858 - -0.4 4,376,004 + -1.1 4,376,004 + -4.0 4,376,004 + -3.9 4,376,005 - -4.0 4,376,005 - -2.3 4,376,043 + -1.8 4,376,103 + -3.3 4,376,103 + -0.7 4,376,103 + -2.6 4,376,103 + -0.9 4,376,103 + -4.1 4,376,103 + -3.2 4,376,103 + -4.2 4,376,103 + -2.8 4,376,103 + -2.0 4,376,103 + -3.9 4,376,104 - -3.5 4,376,104 - -3.8 4,376,104 - -3.3 4,376,104 - -0.9 4,376,104 - -3.6 4,376,104 - -3.0 4,376,104 - -1.4 4,376,104 - -2.5 4,376,104 - -3.8 4,376,104 - -3.6 4,376,104 - -2.6 4,376,104 - -3.1 4,376,104 - -3.8 4,376,106 - -0.5 4,376,106 - -3.5
Or see this region's nucleotide sequence