Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03205

Experiment: PYE_noCalcium 4C survival rep2 58 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 4C survival rep2 58 days
3,365,456	+		CCNA_03204	0.40	-0.5
3,365,473	+		CCNA_03204	0.41	+0.3
3,365,501	+		CCNA_03204	0.44	-0.5
3,365,519	-		CCNA_03204	0.45	-0.5
3,365,528	+		CCNA_03204	0.46	-0.0
3,365,528	+		CCNA_03204	0.46	+0.1
3,365,528	+		CCNA_03204	0.46	+0.6
3,365,528	+		CCNA_03204	0.46	+0.5
3,365,528	+		CCNA_03204	0.46	+0.6
3,365,528	+		CCNA_03204	0.46	-1.3
3,365,528	+		CCNA_03204	0.46	-1.2
3,365,528	+		CCNA_03204	0.46	-0.5
3,365,536	-		CCNA_03204	0.47	+0.7
3,365,536	-		CCNA_03204	0.47	+0.4
3,365,536	-		CCNA_03204	0.47	+0.2
3,365,536	-		CCNA_03204	0.47	+1.7
3,365,536	-		CCNA_03204	0.47	+1.2
3,365,536	-		CCNA_03204	0.47	+0.6
3,365,536	-		CCNA_03204	0.47	+0.7
3,365,536	-		CCNA_03204	0.47	-0.4
3,365,536	-		CCNA_03204	0.47	+1.1
3,365,536	-		CCNA_03204	0.47	-1.0
3,365,536	-		CCNA_03204	0.47	+0.3
3,365,536	-		CCNA_03204	0.47	+0.1
3,365,536	-		CCNA_03204	0.47	-0.7
3,365,536	-		CCNA_03204	0.47	+0.5
3,365,536	-		CCNA_03204	0.47	+0.8
3,365,538	+		CCNA_03204	0.47	+0.8
3,365,564	+		CCNA_03204	0.49	+0.1
3,365,571	+		CCNA_03204	0.50	-1.1
3,365,600	+		CCNA_03204	0.52	-0.4
3,365,600	+		CCNA_03204	0.52	-2.2
3,365,613	-		CCNA_03204	0.53	+0.4
3,365,651	+		CCNA_03204	0.56	+0.1
3,365,664	-		CCNA_03204	0.57	+1.3
3,365,669	-		CCNA_03204	0.58	+1.8
3,365,669	-		CCNA_03204	0.58	+0.5
3,365,670	+		CCNA_03204	0.58	+0.5
3,365,678	-		CCNA_03204	0.58	-2.0
3,365,683	-		CCNA_03204	0.59	+2.3
3,365,683	-		CCNA_03204	0.59	-0.3
3,365,714	-		CCNA_03204	0.61	+0.0
3,365,714	-		CCNA_03204	0.61	-1.4
3,365,739	+		CCNA_03204	0.63	-0.4
3,365,748	+		CCNA_03204	0.64	-0.7
3,365,748	+		CCNA_03204	0.64	+0.0
3,365,748	+		CCNA_03204	0.64	-0.2
3,365,748	+		CCNA_03204	0.64	+1.2
3,365,751	-		CCNA_03204	0.64	+0.6
3,365,756	-		CCNA_03204	0.65	+1.1
3,365,756	-		CCNA_03204	0.65	-1.8
3,365,785	+		CCNA_03204	0.67	+0.1
3,365,790	+		CCNA_03204	0.68	+0.6
3,365,790	+		CCNA_03204	0.68	+1.8
3,365,790	+		CCNA_03204	0.68	+1.3
3,365,798	-		CCNA_03204	0.68	-0.1
3,365,809	+		CCNA_03204	0.69	+0.4
3,365,840	-		CCNA_03204	0.72	-0.5
3,365,840	-		CCNA_03204	0.72	-2.0
3,365,912	-		CCNA_03204	0.78	-0.9
3,365,944	-		CCNA_03204	0.80	-1.1
3,365,944	-		CCNA_03204	0.80	-0.6
3,365,945	-		CCNA_03204	0.80	-2.0
3,365,949	-		CCNA_03204	0.81	+1.5
3,365,985	-		CCNA_03204	0.84	-3.6
3,365,985	-		CCNA_03204	0.84	-2.2
3,365,996	-		CCNA_03204	0.85	+1.3
3,365,996	-		CCNA_03204	0.85	+0.2
3,366,016	+		CCNA_03204	0.86	-0.1
3,366,088	+				-0.0
3,366,097	+				+1.0
3,366,110	-				-3.3
3,366,137	+				+0.8
3,366,137	+				+0.7
3,366,145	-				-1.6
3,366,145	-				+0.7
3,366,154	+				-0.1
3,366,161	+				+0.4
3,366,161	+				+0.0
3,366,161	+				+0.8
3,366,162	-				-0.3
3,366,169	+				+0.5
3,366,169	-				+0.7
3,366,169	-				+0.6
3,366,179	-				-0.5
3,366,346	-				-0.6
3,366,356	+				+0.0
3,366,356	+				-0.8
3,366,356	+				-0.9
3,366,364	-				-0.8
3,366,364	-				-3.4
3,366,435	-				-1.4
3,366,459	+				-1.1
3,366,461	+				-1.9
3,366,485	+				-2.0
3,366,493	-				-1.0
3,366,504	+				-0.5
3,366,504	+				+0.9
3,366,504	+				-1.0
3,366,504	+				+0.3
3,366,504	+				+0.6
3,366,512	-				-0.6
3,366,512	-				-1.5
3,366,512	-				+2.3
3,366,561	+				-0.8
3,366,581	+		CCNA_03205	0.11	-0.9
3,366,589	-		CCNA_03205	0.11	+0.7
3,366,589	-		CCNA_03205	0.11	-1.6
3,366,591	+		CCNA_03205	0.11	-0.6
3,366,591	+		CCNA_03205	0.11	+0.2
3,366,591	+		CCNA_03205	0.11	+0.9
3,366,594	-		CCNA_03205	0.11	+2.3
3,366,599	-		CCNA_03205	0.12	+0.7
3,366,599	-		CCNA_03205	0.12	-1.3
3,366,599	-		CCNA_03205	0.12	-2.0
3,366,642	+		CCNA_03205	0.14	-2.0
3,366,650	+		CCNA_03205	0.15	-0.3
3,366,702	+		CCNA_03205	0.18	-0.2
3,366,702	+		CCNA_03205	0.18	-1.9
3,366,702	+		CCNA_03205	0.18	+1.2
3,366,710	-		CCNA_03205	0.18	-0.4
3,366,722	+		CCNA_03205	0.19	-0.7
3,366,722	+		CCNA_03205	0.19	-1.0
3,366,723	+		CCNA_03205	0.19	+0.9
3,366,730	-		CCNA_03205	0.20	-3.2
3,366,730	-		CCNA_03205	0.20	+0.7
3,366,739	+		CCNA_03205	0.20	-0.3
3,366,763	+		CCNA_03205	0.22	-1.1
3,366,763	+		CCNA_03205	0.22	+0.1
3,366,763	+		CCNA_03205	0.22	+0.9
3,366,771	-		CCNA_03205	0.22	+2.3
3,366,771	-		CCNA_03205	0.22	+2.1
3,366,771	-		CCNA_03205	0.22	-1.4
3,366,771	-		CCNA_03205	0.22	-1.4
3,366,843	+		CCNA_03205	0.26	+0.2
3,366,855	+		CCNA_03205	0.27	-3.9
3,366,862	-		CCNA_03205	0.28	-1.7
3,366,878	-		CCNA_03205	0.29	-2.4
3,366,884	-		CCNA_03205	0.29	-1.3
3,366,925	+		CCNA_03205	0.31	-1.9
3,366,945	+		CCNA_03205	0.33	-2.5
3,366,945	+		CCNA_03205	0.33	+0.1
3,366,953	+		CCNA_03205	0.33	-0.5
3,366,970	+		CCNA_03205	0.34	-1.0
3,366,978	-		CCNA_03205	0.35	+2.3
3,366,996	+		CCNA_03205	0.36	-1.3
3,367,020	-		CCNA_03205	0.37	-1.3
3,367,031	-		CCNA_03205	0.38	-0.0
3,367,076	-		CCNA_03205	0.41	-0.3
3,367,094	-		CCNA_03205	0.42	-1.6
3,367,104	+		CCNA_03205	0.42	-1.3
3,367,129	+		CCNA_03205	0.44	+2.1
3,367,136	+		CCNA_03205	0.44	-2.3
3,367,157	+		CCNA_03205	0.45	-3.8
3,367,167	+		CCNA_03205	0.46	-0.4
3,367,167	+		CCNA_03205	0.46	-0.7
3,367,175	-		CCNA_03205	0.47	-0.3
3,367,175	-		CCNA_03205	0.47	-1.7
3,367,188	-		CCNA_03205	0.47	-0.9
3,367,195	+		CCNA_03205	0.48	-0.0
3,367,200	+		CCNA_03205	0.48	-0.0
3,367,200	+		CCNA_03205	0.48	+0.4
3,367,200	+		CCNA_03205	0.48	+0.3
3,367,200	+		CCNA_03205	0.48	+0.3
3,367,208	-		CCNA_03205	0.49	-1.6
3,367,210	+		CCNA_03205	0.49	-0.8
3,367,232	-		CCNA_03205	0.50	-1.5
3,367,254	+		CCNA_03205	0.51	-1.9
3,367,266	+		CCNA_03205	0.52	-2.0
3,367,266	+		CCNA_03205	0.52	-0.1
3,367,266	+		CCNA_03205	0.52	+1.9
3,367,266	+		CCNA_03205	0.52	-1.3
3,367,266	+		CCNA_03205	0.52	-2.1
3,367,266	+		CCNA_03205	0.52	+0.3
3,367,274	-		CCNA_03205	0.53	-0.1
3,367,274	-		CCNA_03205	0.53	+0.2
3,367,280	-		CCNA_03205	0.53	-1.8
3,367,289	-		CCNA_03205	0.53	-1.0
3,367,408	+		CCNA_03205	0.61	+0.6
3,367,415	-		CCNA_03205	0.61	-2.3
3,367,420	+		CCNA_03205	0.61	-0.0
3,367,520	+		CCNA_03205	0.67	+2.9
3,367,545	-		CCNA_03205	0.69	+2.3
3,367,599	+		CCNA_03205	0.72	+0.3
3,367,626	-		CCNA_03205	0.74	+2.3
3,367,638	+		CCNA_03205	0.75	+0.4
3,367,641	-		CCNA_03205	0.75	+0.7
3,367,646	-		CCNA_03205	0.75	-1.4
3,367,695	+		CCNA_03205	0.78	-3.2
3,367,695	+		CCNA_03205	0.78	+0.5
3,367,695	+		CCNA_03205	0.78	+0.0
3,367,695	+		CCNA_03205	0.78	+1.3
3,367,695	+		CCNA_03205	0.78	+0.6
3,367,703	-		CCNA_03205	0.78	-0.0
3,367,729	-		CCNA_03205	0.80	-2.3
3,367,797	+		CCNA_03205	0.84	+0.4
3,367,810	-		CCNA_03205	0.85	-1.1
3,367,813	+		CCNA_03205	0.85	-0.2
3,367,813	+		CCNA_03205	0.85	-1.3
3,367,813	+		CCNA_03205	0.85	+1.0
3,367,880	-		CCNA_03205	0.89	-0.5
3,367,945	+				+0.8
3,367,945	+				+0.2
3,367,950	+				+0.6
3,367,950	+				+1.2
3,367,950	+				-0.1
3,367,950	+				+1.1
3,367,953	-				-0.5
3,367,958	-				-2.2
3,367,958	-				-1.9
3,367,958	-				-2.4
3,367,991	+				+1.4
3,368,016	+				+0.9
3,368,016	+				+1.2
3,368,016	+				+0.5
3,368,016	+				-1.0
3,368,016	+				+1.4
3,368,016	+				-2.7
3,368,016	+				+0.1
3,368,016	+				+0.7
3,368,024	-				-1.5
3,368,024	-				+1.3
3,368,094	+				+0.8
3,368,094	+				+1.4
3,368,094	+				+1.3
3,368,094	+				+0.9
3,368,102	-				-0.0
3,368,126	+				+1.1
3,368,126	+				+0.6
3,368,141	+				+0.9
3,368,141	+				+0.6
3,368,169	-				-2.1
3,368,244	-				-2.0
3,368,295	+				-1.4
3,368,303	+				-0.6
3,368,327	-				-3.4
3,368,327	-				-0.7
3,368,347	+				-1.1
3,368,407	+		CCNA_03206	0.11	-1.0
3,368,407	+		CCNA_03206	0.11	-1.0
3,368,407	+		CCNA_03206	0.11	-0.3
3,368,415	-		CCNA_03206	0.11	-0.7
3,368,420	-		CCNA_03206	0.11	-2.3
3,368,510	+		CCNA_03206	0.18	-2.2
3,368,517	-		CCNA_03206	0.18	+1.3
3,368,522	+		CCNA_03206	0.19	-2.4
3,368,522	+		CCNA_03206	0.19	-0.0
3,368,524	+		CCNA_03206	0.19	+0.2
3,368,530	-		CCNA_03206	0.19	-1.9
3,368,532	-		CCNA_03206	0.20	-1.0
3,368,557	+		CCNA_03206	0.21	+0.4
3,368,562	-		CCNA_03206	0.22	-1.9
3,368,577	+		CCNA_03206	0.23	-2.6
3,368,639	+		CCNA_03206	0.27	+1.2
3,368,647	-		CCNA_03206	0.28	-1.2
3,368,647	-		CCNA_03206	0.28	-0.9
3,368,652	-		CCNA_03206	0.28	-3.0
3,368,652	-		CCNA_03206	0.28	-2.0
3,368,654	+		CCNA_03206	0.28	-2.5
3,368,667	-		CCNA_03206	0.29	-0.7
3,368,669	+		CCNA_03206	0.29	-3.1
3,368,670	+		CCNA_03206	0.29	-2.0
3,368,674	+		CCNA_03206	0.30	-0.4
3,368,674	+		CCNA_03206	0.30	-2.9
3,368,674	+		CCNA_03206	0.30	-0.7
3,368,699	-		CCNA_03206	0.32	-3.0
3,368,756	+		CCNA_03206	0.36	-3.7
3,368,793	+		CCNA_03206	0.38	-1.4
3,368,816	+		CCNA_03206	0.40	-2.0
3,368,838	-		CCNA_03206	0.42	-2.1
3,368,842	+		CCNA_03206	0.42	-4.0
3,368,878	+		CCNA_03206	0.44	-0.6
3,368,923	+		CCNA_03206	0.48	-0.3
3,368,923	+		CCNA_03206	0.48	-0.1
3,368,928	+		CCNA_03206	0.48	+1.6
3,368,931	-		CCNA_03206	0.48	+1.3
3,368,978	+		CCNA_03206	0.52	-1.6
3,368,986	-		CCNA_03206	0.52	-2.6
3,369,002	+		CCNA_03206	0.53	-0.7
3,369,019	-		CCNA_03206	0.55	+1.3
3,369,053	+		CCNA_03206	0.57	-1.0