Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26385

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26380 and BWI76_RS26385 are separated by 31 nucleotidesBWI76_RS26385 and BWI76_RS26390 are separated by 256 nucleotides BWI76_RS26380: BWI76_RS26380 - decarboxylase, at 5,460,660 to 5,462,174 _RS26380 BWI76_RS26385: BWI76_RS26385 - RNA polymerase sigma factor RpoH, at 5,462,206 to 5,463,060 _RS26385 BWI76_RS26390: BWI76_RS26390 - cell division protein FtsX, at 5,463,317 to 5,464,375 _RS26390 Position (kb) 5462 5463 5464Strain fitness (log2 ratio) -3 -2 -1 0 1at 5461.234 kb on - strand, within BWI76_RS26380at 5461.245 kb on - strand, within BWI76_RS26380at 5461.283 kb on - strand, within BWI76_RS26380at 5461.500 kb on - strand, within BWI76_RS26380at 5461.615 kb on - strand, within BWI76_RS26380at 5461.639 kb on - strand, within BWI76_RS26380at 5461.687 kb on - strand, within BWI76_RS26380at 5461.819 kb on + strand, within BWI76_RS26380at 5462.048 kb on + strandat 5462.128 kb on + strandat 5462.212 kb on - strandat 5463.135 kb on - strandat 5463.164 kb on - strandat 5463.256 kb on + strandat 5463.441 kb on - strand, within BWI76_RS26390at 5463.615 kb on - strand, within BWI76_RS26390at 5463.904 kb on + strand, within BWI76_RS26390at 5463.904 kb on + strand, within BWI76_RS26390at 5463.986 kb on - strand, within BWI76_RS26390at 5464.056 kb on + strand, within BWI76_RS26390

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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5,461,234 - BWI76_RS26380 0.38 -1.5
5,461,245 - BWI76_RS26380 0.39 +0.8
5,461,283 - BWI76_RS26380 0.41 -0.3
5,461,500 - BWI76_RS26380 0.55 -0.8
5,461,615 - BWI76_RS26380 0.63 +0.1
5,461,639 - BWI76_RS26380 0.65 +0.8
5,461,687 - BWI76_RS26380 0.68 -0.2
5,461,819 + BWI76_RS26380 0.77 +0.0
5,462,048 + -0.1
5,462,128 + -0.8
5,462,212 - +0.0
5,463,135 - -0.6
5,463,164 - +0.2
5,463,256 + -1.8
5,463,441 - BWI76_RS26390 0.12 -0.8
5,463,615 - BWI76_RS26390 0.28 +0.1
5,463,904 + BWI76_RS26390 0.55 +0.0
5,463,904 + BWI76_RS26390 0.55 -0.8
5,463,986 - BWI76_RS26390 0.63 -2.9
5,464,056 + BWI76_RS26390 0.70 -0.7

Or see this region's nucleotide sequence