Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS25555

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS25550 and BWI76_RS25555 are separated by 11 nucleotidesBWI76_RS25555 and BWI76_RS25560 are separated by 138 nucleotides BWI76_RS25550: BWI76_RS25550 - sodium:pantothenate symporter, at 5,309,235 to 5,310,686 _RS25550 BWI76_RS25555: BWI76_RS25555 - 50S ribosomal protein L11 methyltransferase, at 5,310,698 to 5,311,579 _RS25555 BWI76_RS25560: BWI76_RS25560 - carbonic anhydrase, at 5,311,718 to 5,312,458 _RS25560 Position (kb) 5310 5311 5312Strain fitness (log2 ratio) -1 0 1 2at 5309.744 kb on + strand, within BWI76_RS25550at 5309.745 kb on + strand, within BWI76_RS25550at 5309.747 kb on + strand, within BWI76_RS25550at 5309.799 kb on + strand, within BWI76_RS25550at 5309.807 kb on - strand, within BWI76_RS25550at 5309.974 kb on + strand, within BWI76_RS25550at 5309.982 kb on - strand, within BWI76_RS25550at 5309.982 kb on - strand, within BWI76_RS25550at 5310.121 kb on - strand, within BWI76_RS25550at 5310.213 kb on + strand, within BWI76_RS25550at 5310.303 kb on - strand, within BWI76_RS25550at 5310.447 kb on - strand, within BWI76_RS25550at 5310.482 kb on - strand, within BWI76_RS25550at 5310.537 kb on + strand, within BWI76_RS25550at 5311.003 kb on + strand, within BWI76_RS25555at 5311.285 kb on - strand, within BWI76_RS25555at 5311.339 kb on + strand, within BWI76_RS25555at 5311.469 kb on + strand, within BWI76_RS25555at 5311.541 kb on + strandat 5311.669 kb on + strandat 5311.669 kb on + strandat 5311.670 kb on - strandat 5311.677 kb on - strandat 5311.706 kb on - strandat 5311.751 kb on + strandat 5311.821 kb on + strand, within BWI76_RS25560at 5311.843 kb on + strand, within BWI76_RS25560at 5311.958 kb on + strand, within BWI76_RS25560at 5312.114 kb on - strand, within BWI76_RS25560at 5312.162 kb on - strand, within BWI76_RS25560at 5312.205 kb on + strand, within BWI76_RS25560at 5312.273 kb on + strand, within BWI76_RS25560at 5312.308 kb on - strand, within BWI76_RS25560at 5312.322 kb on - strand, within BWI76_RS25560at 5312.327 kb on - strand, within BWI76_RS25560at 5312.362 kb on - strand, within BWI76_RS25560at 5312.372 kb on - strand, within BWI76_RS25560

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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5,309,744 + BWI76_RS25550 0.35 +0.5
5,309,745 + BWI76_RS25550 0.35 +0.0
5,309,747 + BWI76_RS25550 0.35 -0.4
5,309,799 + BWI76_RS25550 0.39 -0.5
5,309,807 - BWI76_RS25550 0.39 -0.3
5,309,974 + BWI76_RS25550 0.51 +0.2
5,309,982 - BWI76_RS25550 0.51 +1.9
5,309,982 - BWI76_RS25550 0.51 -0.7
5,310,121 - BWI76_RS25550 0.61 -0.3
5,310,213 + BWI76_RS25550 0.67 -0.6
5,310,303 - BWI76_RS25550 0.74 -0.6
5,310,447 - BWI76_RS25550 0.83 -0.3
5,310,482 - BWI76_RS25550 0.86 +0.1
5,310,537 + BWI76_RS25550 0.90 -0.0
5,311,003 + BWI76_RS25555 0.35 +0.8
5,311,285 - BWI76_RS25555 0.67 +0.5
5,311,339 + BWI76_RS25555 0.73 +0.4
5,311,469 + BWI76_RS25555 0.87 -0.1
5,311,541 + -0.6
5,311,669 + -1.0
5,311,669 + +0.1
5,311,670 - +0.9
5,311,677 - -0.6
5,311,706 - -0.8
5,311,751 + +1.0
5,311,821 + BWI76_RS25560 0.14 -0.8
5,311,843 + BWI76_RS25560 0.17 +0.7
5,311,958 + BWI76_RS25560 0.32 +0.5
5,312,114 - BWI76_RS25560 0.53 -1.7
5,312,162 - BWI76_RS25560 0.60 -0.1
5,312,205 + BWI76_RS25560 0.66 +0.8
5,312,273 + BWI76_RS25560 0.75 -0.3
5,312,308 - BWI76_RS25560 0.80 +0.9
5,312,322 - BWI76_RS25560 0.82 +0.4
5,312,327 - BWI76_RS25560 0.82 -0.9
5,312,362 - BWI76_RS25560 0.87 -0.4
5,312,372 - BWI76_RS25560 0.88 -1.3

Or see this region's nucleotide sequence