Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24155 and BWI76_RS24160 are separated by 27 nucleotides BWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotides
BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998
_RS24155
BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301
_RS24160
BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434
_RS24165
Position (kb) 5037
5038 Strain fitness (log2 ratio) -1
0
1
2 at 5036.181 kb on - strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.212 kb on + strand, within BWI76_RS24155 at 5036.291 kb on + strand, within BWI76_RS24155 at 5036.299 kb on - strand, within BWI76_RS24155 at 5036.386 kb on + strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.394 kb on - strand, within BWI76_RS24155 at 5036.491 kb on + strand, within BWI76_RS24155 at 5037.006 kb on - strand at 5037.137 kb on + strand, within BWI76_RS24160 at 5037.296 kb on + strand at 5037.435 kb on - strand at 5037.585 kb on + strand, within BWI76_RS24165 at 5037.697 kb on - strand at 5037.698 kb on - strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.884 kb on + strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5037.892 kb on - strand, within BWI76_RS24165 at 5038.068 kb on + strand, within BWI76_RS24165 at 5038.076 kb on - strand, within BWI76_RS24165 at 5038.190 kb on + strand, within BWI76_RS24165 at 5038.198 kb on - strand, within BWI76_RS24165 at 5038.222 kb on - strand, within BWI76_RS24165 at 5038.296 kb on + strand, within BWI76_RS24165
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 5,036,181 - BWI76_RS24155 0.23 -0.3 5,036,212 + BWI76_RS24155 0.26 +0.5 5,036,212 + BWI76_RS24155 0.26 -1.1 5,036,291 + BWI76_RS24155 0.33 -0.7 5,036,299 - BWI76_RS24155 0.34 -0.2 5,036,386 + BWI76_RS24155 0.42 -0.0 5,036,394 - BWI76_RS24155 0.43 -0.5 5,036,394 - BWI76_RS24155 0.43 +2.4 5,036,491 + BWI76_RS24155 0.52 -1.2 5,037,006 - -1.5 5,037,137 + BWI76_RS24160 0.40 +0.1 5,037,296 + +0.7 5,037,435 - -0.4 5,037,585 + BWI76_RS24165 0.22 -0.8 5,037,697 - +2.2 5,037,698 - BWI76_RS24165 0.32 -0.5 5,037,884 + BWI76_RS24165 0.49 -0.2 5,037,884 + BWI76_RS24165 0.49 -0.3 5,037,892 - BWI76_RS24165 0.50 +0.2 5,037,892 - BWI76_RS24165 0.50 +0.8 5,037,892 - BWI76_RS24165 0.50 -0.4 5,037,892 - BWI76_RS24165 0.50 +0.8 5,037,892 - BWI76_RS24165 0.50 -0.5 5,038,068 + BWI76_RS24165 0.66 +2.2 5,038,076 - BWI76_RS24165 0.67 -0.1 5,038,190 + BWI76_RS24165 0.77 +0.1 5,038,198 - BWI76_RS24165 0.78 -0.4 5,038,222 - BWI76_RS24165 0.80 +0.3 5,038,296 + BWI76_RS24165 0.87 +0.1
Or see this region's nucleotide sequence