Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24160

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24155 and BWI76_RS24160 are separated by 27 nucleotidesBWI76_RS24160 and BWI76_RS24165 are separated by 47 nucleotides BWI76_RS24155: BWI76_RS24155 - A/G-specific adenine glycosylase, at 5,035,940 to 5,036,998 _RS24155 BWI76_RS24160: BWI76_RS24160 - Fe(2+)-trafficking protein, at 5,037,026 to 5,037,301 _RS24160 BWI76_RS24165: BWI76_RS24165 - lytic murein transglycosylase, at 5,037,349 to 5,038,434 _RS24165 Position (kb) 5037 5038Strain fitness (log2 ratio) -1 0 1 2at 5036.181 kb on - strand, within BWI76_RS24155at 5036.212 kb on + strand, within BWI76_RS24155at 5036.212 kb on + strand, within BWI76_RS24155at 5036.291 kb on + strand, within BWI76_RS24155at 5036.299 kb on - strand, within BWI76_RS24155at 5036.386 kb on + strand, within BWI76_RS24155at 5036.394 kb on - strand, within BWI76_RS24155at 5036.394 kb on - strand, within BWI76_RS24155at 5036.491 kb on + strand, within BWI76_RS24155at 5037.006 kb on - strandat 5037.137 kb on + strand, within BWI76_RS24160at 5037.296 kb on + strandat 5037.435 kb on - strandat 5037.585 kb on + strand, within BWI76_RS24165at 5037.697 kb on - strandat 5037.698 kb on - strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.884 kb on + strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5037.892 kb on - strand, within BWI76_RS24165at 5038.068 kb on + strand, within BWI76_RS24165at 5038.076 kb on - strand, within BWI76_RS24165at 5038.190 kb on + strand, within BWI76_RS24165at 5038.198 kb on - strand, within BWI76_RS24165at 5038.222 kb on - strand, within BWI76_RS24165at 5038.296 kb on + strand, within BWI76_RS24165

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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5,036,181 - BWI76_RS24155 0.23 -0.3
5,036,212 + BWI76_RS24155 0.26 +0.5
5,036,212 + BWI76_RS24155 0.26 -1.1
5,036,291 + BWI76_RS24155 0.33 -0.7
5,036,299 - BWI76_RS24155 0.34 -0.2
5,036,386 + BWI76_RS24155 0.42 -0.0
5,036,394 - BWI76_RS24155 0.43 -0.5
5,036,394 - BWI76_RS24155 0.43 +2.4
5,036,491 + BWI76_RS24155 0.52 -1.2
5,037,006 - -1.5
5,037,137 + BWI76_RS24160 0.40 +0.1
5,037,296 + +0.7
5,037,435 - -0.4
5,037,585 + BWI76_RS24165 0.22 -0.8
5,037,697 - +2.2
5,037,698 - BWI76_RS24165 0.32 -0.5
5,037,884 + BWI76_RS24165 0.49 -0.2
5,037,884 + BWI76_RS24165 0.49 -0.3
5,037,892 - BWI76_RS24165 0.50 +0.2
5,037,892 - BWI76_RS24165 0.50 +0.8
5,037,892 - BWI76_RS24165 0.50 -0.4
5,037,892 - BWI76_RS24165 0.50 +0.8
5,037,892 - BWI76_RS24165 0.50 -0.5
5,038,068 + BWI76_RS24165 0.66 +2.2
5,038,076 - BWI76_RS24165 0.67 -0.1
5,038,190 + BWI76_RS24165 0.77 +0.1
5,038,198 - BWI76_RS24165 0.78 -0.4
5,038,222 - BWI76_RS24165 0.80 +0.3
5,038,296 + BWI76_RS24165 0.87 +0.1

Or see this region's nucleotide sequence