Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23265 and BWI76_RS23270 are separated by 227 nucleotides BWI76_RS23270 and BWI76_RS23275 are separated by 12 nucleotides BWI76_RS23275 and BWI76_RS23280 are separated by 39 nucleotides BWI76_RS23280 and BWI76_RS23285 are separated by 219 nucleotides
BWI76_RS23265: BWI76_RS23265 - hypothetical protein, at 4,852,180 to 4,853,856
_RS23265
BWI76_RS23270: BWI76_RS23270 - phosphoenolpyruvate--protein phosphotransferase PtsP, at 4,854,084 to 4,856,330
_RS23270
BWI76_RS23275: BWI76_RS23275 - RNA pyrophosphohydrolase, at 4,856,343 to 4,856,873
_RS23275
BWI76_RS23280: BWI76_RS23280 - hypothetical protein, at 4,856,913 to 4,857,095
_RS23280
BWI76_RS23285: BWI76_RS23285 - hypothetical protein, at 4,857,315 to 4,857,539
_RS23285
Position (kb)
4854
4855
4856
4857 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4854.079 kb on - strand at 4854.670 kb on + strand, within BWI76_RS23270 at 4854.740 kb on + strand, within BWI76_RS23270 at 4854.877 kb on + strand, within BWI76_RS23270 at 4854.885 kb on - strand, within BWI76_RS23270 at 4854.885 kb on - strand, within BWI76_RS23270 at 4854.992 kb on + strand, within BWI76_RS23270 at 4855.076 kb on - strand, within BWI76_RS23270 at 4855.181 kb on + strand, within BWI76_RS23270 at 4855.181 kb on + strand, within BWI76_RS23270 at 4855.189 kb on - strand, within BWI76_RS23270 at 4855.189 kb on - strand, within BWI76_RS23270 at 4855.329 kb on + strand, within BWI76_RS23270 at 4855.370 kb on + strand, within BWI76_RS23270 at 4855.473 kb on - strand, within BWI76_RS23270 at 4855.601 kb on + strand, within BWI76_RS23270 at 4855.717 kb on + strand, within BWI76_RS23270 at 4855.935 kb on - strand, within BWI76_RS23270 at 4856.079 kb on - strand, within BWI76_RS23270 at 4856.334 kb on - strand at 4856.389 kb on - strand at 4856.929 kb on + strand at 4856.995 kb on + strand, within BWI76_RS23280 at 4857.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,854,079 - +0.8 4,854,670 + BWI76_RS23270 0.26 +1.8 4,854,740 + BWI76_RS23270 0.29 +0.3 4,854,877 + BWI76_RS23270 0.35 +1.9 4,854,885 - BWI76_RS23270 0.36 -0.1 4,854,885 - BWI76_RS23270 0.36 +0.8 4,854,992 + BWI76_RS23270 0.40 +0.9 4,855,076 - BWI76_RS23270 0.44 +0.6 4,855,181 + BWI76_RS23270 0.49 +1.0 4,855,181 + BWI76_RS23270 0.49 +0.3 4,855,189 - BWI76_RS23270 0.49 -0.8 4,855,189 - BWI76_RS23270 0.49 +0.6 4,855,329 + BWI76_RS23270 0.55 -0.3 4,855,370 + BWI76_RS23270 0.57 +0.3 4,855,473 - BWI76_RS23270 0.62 +1.2 4,855,601 + BWI76_RS23270 0.68 -0.3 4,855,717 + BWI76_RS23270 0.73 -0.4 4,855,935 - BWI76_RS23270 0.82 +0.2 4,856,079 - BWI76_RS23270 0.89 -0.3 4,856,334 - -2.1 4,856,389 - -1.6 4,856,929 + -1.1 4,856,995 + BWI76_RS23280 0.45 +1.2 4,857,274 - +1.8
Or see this region's nucleotide sequence