Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23050

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23040 and BWI76_RS23045 are separated by 10 nucleotidesBWI76_RS23045 and BWI76_RS23050 overlap by 4 nucleotidesBWI76_RS23050 and BWI76_RS23055 overlap by 1 nucleotides BWI76_RS23040: BWI76_RS23040 - sirohydrochlorin cobaltochelatase, at 4,805,250 to 4,806,044 _RS23040 BWI76_RS23045: BWI76_RS23045 - cobalt-precorrin-6A/precorrin-6x reductase, at 4,806,055 to 4,806,834 _RS23045 BWI76_RS23050: BWI76_RS23050 - cobalt-precorrin-3B C(17)-methyltransferase, at 4,806,831 to 4,807,556 _RS23050 BWI76_RS23055: BWI76_RS23055 - cobalamin biosynthesis protein CbiG, at 4,807,556 to 4,808,611 _RS23055 Position (kb) 4806 4807 4808Strain fitness (log2 ratio) -2 -1 0 1at 4805.863 kb on + strand, within BWI76_RS23040at 4805.888 kb on + strand, within BWI76_RS23040at 4806.162 kb on + strand, within BWI76_RS23045at 4806.304 kb on + strand, within BWI76_RS23045at 4806.449 kb on + strand, within BWI76_RS23045at 4806.477 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.494 kb on + strand, within BWI76_RS23045at 4806.523 kb on + strand, within BWI76_RS23045at 4806.613 kb on - strand, within BWI76_RS23045at 4806.836 kb on + strandat 4806.846 kb on - strandat 4806.992 kb on - strand, within BWI76_RS23050at 4807.031 kb on + strand, within BWI76_RS23050at 4807.031 kb on + strand, within BWI76_RS23050at 4807.609 kb on - strandat 4807.785 kb on - strand, within BWI76_RS23055at 4807.839 kb on - strand, within BWI76_RS23055at 4808.209 kb on + strand, within BWI76_RS23055

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,805,863 + BWI76_RS23040 0.77 -0.9
4,805,888 + BWI76_RS23040 0.80 -0.1
4,806,162 + BWI76_RS23045 0.14 -1.5
4,806,304 + BWI76_RS23045 0.32 -0.7
4,806,449 + BWI76_RS23045 0.51 -1.2
4,806,477 + BWI76_RS23045 0.54 +0.4
4,806,494 + BWI76_RS23045 0.56 +0.5
4,806,494 + BWI76_RS23045 0.56 -1.0
4,806,494 + BWI76_RS23045 0.56 +1.4
4,806,494 + BWI76_RS23045 0.56 +0.3
4,806,494 + BWI76_RS23045 0.56 +1.1
4,806,494 + BWI76_RS23045 0.56 -2.0
4,806,523 + BWI76_RS23045 0.60 -0.7
4,806,613 - BWI76_RS23045 0.72 +0.1
4,806,836 + +0.2
4,806,846 - -0.2
4,806,992 - BWI76_RS23050 0.22 +0.9
4,807,031 + BWI76_RS23050 0.28 -0.3
4,807,031 + BWI76_RS23050 0.28 +0.9
4,807,609 - -1.3
4,807,785 - BWI76_RS23055 0.22 -0.1
4,807,839 - BWI76_RS23055 0.27 -0.4
4,808,209 + BWI76_RS23055 0.62 -1.0

Or see this region's nucleotide sequence