Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22240 and BWI76_RS22245 overlap by 8 nucleotides BWI76_RS22245 and BWI76_RS22250 overlap by 38 nucleotides BWI76_RS22250 and BWI76_RS22255 overlap by 1 nucleotides BWI76_RS22255 and BWI76_RS22260 are separated by 95 nucleotides
BWI76_RS22240: BWI76_RS22240 - transcriptional regulator, at 4,635,396 to 4,636,169
_RS22240
BWI76_RS22245: BWI76_RS22245 - arabinose 5-phosphate isomerase GutQ, at 4,636,162 to 4,637,127
_RS22245
BWI76_RS22250: BWI76_RS22250 - nitric oxide reductase transcription regulator, at 4,637,090 to 4,638,634
_RS22250
BWI76_RS22255: BWI76_RS22255 - transcriptional regulator, at 4,638,634 to 4,638,726
_RS22255
BWI76_RS22260: BWI76_RS22260 - anaerobic nitric oxide reductase flavorubredoxin, at 4,638,822 to 4,640,267
_RS22260
Position (kb)
4637
4638
4639 Strain fitness (log2 ratio)
-2
-1
0
1 at 4636.176 kb on + strand at 4636.196 kb on + strand at 4636.356 kb on - strand, within BWI76_RS22245 at 4636.472 kb on - strand, within BWI76_RS22245 at 4636.513 kb on - strand, within BWI76_RS22245 at 4636.622 kb on + strand, within BWI76_RS22245 at 4636.623 kb on + strand, within BWI76_RS22245 at 4636.835 kb on - strand, within BWI76_RS22245 at 4636.847 kb on + strand, within BWI76_RS22245 at 4637.022 kb on - strand, within BWI76_RS22245 at 4637.163 kb on - strand at 4637.358 kb on - strand, within BWI76_RS22250 at 4637.886 kb on + strand, within BWI76_RS22250 at 4638.004 kb on + strand, within BWI76_RS22250 at 4638.077 kb on + strand, within BWI76_RS22250 at 4638.102 kb on + strand, within BWI76_RS22250 at 4638.119 kb on - strand, within BWI76_RS22250 at 4638.169 kb on - strand, within BWI76_RS22250 at 4638.216 kb on - strand, within BWI76_RS22250 at 4638.235 kb on - strand, within BWI76_RS22250 at 4638.260 kb on + strand, within BWI76_RS22250 at 4638.458 kb on - strand, within BWI76_RS22250 at 4638.543 kb on + strand at 4638.858 kb on + strand at 4638.876 kb on - strand at 4638.900 kb on - strand at 4639.181 kb on - strand, within BWI76_RS22260 at 4639.302 kb on + strand, within BWI76_RS22260 at 4639.339 kb on - strand, within BWI76_RS22260 at 4639.339 kb on - strand, within BWI76_RS22260 at 4639.405 kb on - strand, within BWI76_RS22260
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,636,176 + +1.2 4,636,196 + -1.2 4,636,356 - BWI76_RS22245 0.20 -0.8 4,636,472 - BWI76_RS22245 0.32 -1.2 4,636,513 - BWI76_RS22245 0.36 -0.6 4,636,622 + BWI76_RS22245 0.48 -0.3 4,636,623 + BWI76_RS22245 0.48 +0.8 4,636,835 - BWI76_RS22245 0.70 -0.5 4,636,847 + BWI76_RS22245 0.71 +0.6 4,637,022 - BWI76_RS22245 0.89 -0.1 4,637,163 - -0.3 4,637,358 - BWI76_RS22250 0.17 -0.2 4,637,886 + BWI76_RS22250 0.52 -0.1 4,638,004 + BWI76_RS22250 0.59 -1.0 4,638,077 + BWI76_RS22250 0.64 -1.9 4,638,102 + BWI76_RS22250 0.66 -2.0 4,638,119 - BWI76_RS22250 0.67 +0.6 4,638,169 - BWI76_RS22250 0.70 -0.6 4,638,216 - BWI76_RS22250 0.73 -2.2 4,638,235 - BWI76_RS22250 0.74 -0.8 4,638,260 + BWI76_RS22250 0.76 -0.8 4,638,458 - BWI76_RS22250 0.89 +0.0 4,638,543 + -0.6 4,638,858 + -1.1 4,638,876 - +0.6 4,638,900 - -0.8 4,639,181 - BWI76_RS22260 0.25 -0.3 4,639,302 + BWI76_RS22260 0.33 +1.2 4,639,339 - BWI76_RS22260 0.36 +0.0 4,639,339 - BWI76_RS22260 0.36 -0.4 4,639,405 - BWI76_RS22260 0.40 +0.5
Or see this region's nucleotide sequence