Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20805 and BWI76_RS20810 overlap by 4 nucleotides BWI76_RS20810 and BWI76_RS20815 overlap by 4 nucleotides BWI76_RS20815 and BWI76_RS20820 overlap by 23 nucleotides
BWI76_RS20805: BWI76_RS20805 - phosphate acetyltransferase, at 4,348,044 to 4,349,060
_RS20805
BWI76_RS20810: BWI76_RS20810 - ethanolamine utilization cobalamin adenosyltransferase, at 4,349,057 to 4,349,860
_RS20810
BWI76_RS20815: BWI76_RS20815 - ethanolamine utilization protein EutQ, at 4,349,857 to 4,350,549
_RS20815
BWI76_RS20820: BWI76_RS20820 - ethanolamine utilization protein EutP, at 4,350,527 to 4,351,006
_RS20820
Position (kb) 4349
4350 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4348.572 kb on + strand, within BWI76_RS20805 at 4348.572 kb on + strand, within BWI76_RS20805 at 4348.572 kb on + strand, within BWI76_RS20805 at 4348.910 kb on + strand, within BWI76_RS20805 at 4349.142 kb on + strand, within BWI76_RS20810 at 4349.150 kb on - strand, within BWI76_RS20810 at 4349.150 kb on - strand, within BWI76_RS20810 at 4349.150 kb on - strand, within BWI76_RS20810 at 4349.150 kb on - strand, within BWI76_RS20810 at 4349.196 kb on - strand, within BWI76_RS20810 at 4349.340 kb on + strand, within BWI76_RS20810 at 4349.958 kb on - strand, within BWI76_RS20815 at 4349.963 kb on + strand, within BWI76_RS20815 at 4350.030 kb on + strand, within BWI76_RS20815 at 4350.040 kb on - strand, within BWI76_RS20815 at 4350.080 kb on - strand, within BWI76_RS20815 at 4350.095 kb on + strand, within BWI76_RS20815 at 4350.141 kb on + strand, within BWI76_RS20815 at 4350.197 kb on - strand, within BWI76_RS20815 at 4350.216 kb on + strand, within BWI76_RS20815 at 4350.224 kb on - strand, within BWI76_RS20815 at 4350.314 kb on + strand, within BWI76_RS20815 at 4350.351 kb on + strand, within BWI76_RS20815 at 4350.606 kb on - strand, within BWI76_RS20820 at 4350.609 kb on + strand, within BWI76_RS20820 at 4350.657 kb on + strand, within BWI76_RS20820 at 4350.665 kb on - strand, within BWI76_RS20820 at 4350.700 kb on + strand, within BWI76_RS20820 at 4350.757 kb on - strand, within BWI76_RS20820 at 4350.761 kb on + strand, within BWI76_RS20820 at 4350.763 kb on - strand, within BWI76_RS20820 at 4350.771 kb on - strand, within BWI76_RS20820 at 4350.778 kb on - strand, within BWI76_RS20820 at 4350.795 kb on + strand, within BWI76_RS20820 at 4350.795 kb on + strand, within BWI76_RS20820 at 4350.796 kb on + strand, within BWI76_RS20820 at 4350.803 kb on - strand, within BWI76_RS20820 at 4350.813 kb on + strand, within BWI76_RS20820 at 4350.813 kb on + strand, within BWI76_RS20820 at 4350.850 kb on - strand, within BWI76_RS20820 at 4350.850 kb on - strand, within BWI76_RS20820
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,348,572 + BWI76_RS20805 0.52 -0.1 4,348,572 + BWI76_RS20805 0.52 -2.5 4,348,572 + BWI76_RS20805 0.52 +0.1 4,348,910 + BWI76_RS20805 0.85 +1.2 4,349,142 + BWI76_RS20810 0.11 -2.2 4,349,150 - BWI76_RS20810 0.12 -0.5 4,349,150 - BWI76_RS20810 0.12 -0.9 4,349,150 - BWI76_RS20810 0.12 -0.4 4,349,150 - BWI76_RS20810 0.12 -2.2 4,349,196 - BWI76_RS20810 0.17 -0.8 4,349,340 + BWI76_RS20810 0.35 -1.8 4,349,958 - BWI76_RS20815 0.15 -0.1 4,349,963 + BWI76_RS20815 0.15 -2.0 4,350,030 + BWI76_RS20815 0.25 +1.8 4,350,040 - BWI76_RS20815 0.26 +0.1 4,350,080 - BWI76_RS20815 0.32 -2.0 4,350,095 + BWI76_RS20815 0.34 +0.9 4,350,141 + BWI76_RS20815 0.41 +1.4 4,350,197 - BWI76_RS20815 0.49 -0.4 4,350,216 + BWI76_RS20815 0.52 -0.3 4,350,224 - BWI76_RS20815 0.53 -0.1 4,350,314 + BWI76_RS20815 0.66 -0.8 4,350,351 + BWI76_RS20815 0.71 -0.3 4,350,606 - BWI76_RS20820 0.16 -2.9 4,350,609 + BWI76_RS20820 0.17 -0.7 4,350,657 + BWI76_RS20820 0.27 -0.1 4,350,665 - BWI76_RS20820 0.29 -0.7 4,350,700 + BWI76_RS20820 0.36 +0.3 4,350,757 - BWI76_RS20820 0.48 -0.0 4,350,761 + BWI76_RS20820 0.49 -0.4 4,350,763 - BWI76_RS20820 0.49 -0.7 4,350,771 - BWI76_RS20820 0.51 -1.4 4,350,778 - BWI76_RS20820 0.52 -0.5 4,350,795 + BWI76_RS20820 0.56 +0.6 4,350,795 + BWI76_RS20820 0.56 -0.1 4,350,796 + BWI76_RS20820 0.56 -0.8 4,350,803 - BWI76_RS20820 0.57 -0.3 4,350,813 + BWI76_RS20820 0.60 -0.7 4,350,813 + BWI76_RS20820 0.60 +1.2 4,350,850 - BWI76_RS20820 0.67 -0.8 4,350,850 - BWI76_RS20820 0.67 -0.3
Or see this region's nucleotide sequence