Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20690 and BWI76_RS20695 overlap by 11 nucleotides BWI76_RS20695 and BWI76_RS20700 overlap by 1 nucleotides BWI76_RS20700 and BWI76_RS20705 overlap by 1 nucleotides
BWI76_RS20690: BWI76_RS20690 - sulfate ABC transporter ATP-binding protein, at 4,327,867 to 4,328,961
_RS20690
BWI76_RS20695: BWI76_RS20695 - sulfate/thiosulfate transporter permease subunit, at 4,328,951 to 4,329,826
_RS20695
BWI76_RS20700: BWI76_RS20700 - sulfate/thiosulfate transporter subunit, at 4,329,826 to 4,330,659
_RS20700
BWI76_RS20705: BWI76_RS20705 - thiosulfate transporter subunit, at 4,330,659 to 4,331,675
_RS20705
Position (kb) 4329
4330
4331 Strain fitness (log2 ratio) -1
0
1
2
3 at 4328.885 kb on - strand at 4328.914 kb on - strand at 4329.541 kb on - strand, within BWI76_RS20695 at 4329.542 kb on + strand, within BWI76_RS20695 at 4329.550 kb on - strand, within BWI76_RS20695 at 4329.748 kb on + strand at 4329.874 kb on - strand at 4330.165 kb on + strand, within BWI76_RS20700 at 4330.224 kb on - strand, within BWI76_RS20700 at 4330.325 kb on - strand, within BWI76_RS20700 at 4330.512 kb on + strand, within BWI76_RS20700 at 4330.514 kb on + strand, within BWI76_RS20700 at 4330.520 kb on - strand, within BWI76_RS20700 at 4330.980 kb on + strand, within BWI76_RS20705 at 4331.072 kb on - strand, within BWI76_RS20705 at 4331.253 kb on + strand, within BWI76_RS20705 at 4331.340 kb on - strand, within BWI76_RS20705 at 4331.370 kb on - strand, within BWI76_RS20705 at 4331.440 kb on - strand, within BWI76_RS20705 at 4331.509 kb on + strand, within BWI76_RS20705 at 4331.586 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 4,328,885 - +1.8 4,328,914 - +1.8 4,329,541 - BWI76_RS20695 0.67 +1.6 4,329,542 + BWI76_RS20695 0.67 +0.0 4,329,550 - BWI76_RS20695 0.68 +1.1 4,329,748 + +2.2 4,329,874 - +1.6 4,330,165 + BWI76_RS20700 0.41 +1.9 4,330,224 - BWI76_RS20700 0.48 +2.1 4,330,325 - BWI76_RS20700 0.60 +1.9 4,330,512 + BWI76_RS20700 0.82 +2.2 4,330,514 + BWI76_RS20700 0.82 +2.0 4,330,520 - BWI76_RS20700 0.83 +2.0 4,330,980 + BWI76_RS20705 0.32 +1.0 4,331,072 - BWI76_RS20705 0.41 +1.5 4,331,253 + BWI76_RS20705 0.58 -0.0 4,331,340 - BWI76_RS20705 0.67 +1.0 4,331,370 - BWI76_RS20705 0.70 +0.5 4,331,440 - BWI76_RS20705 0.77 +1.9 4,331,509 + BWI76_RS20705 0.84 +1.8 4,331,586 + +2.9
Or see this region's nucleotide sequence