Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19355

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19350 and BWI76_RS19355 are separated by 21 nucleotidesBWI76_RS19355 and BWI76_RS19360 are separated by 256 nucleotides BWI76_RS19350: BWI76_RS19350 - DeoR family transcriptional regulator, at 4,032,481 to 4,033,422 _RS19350 BWI76_RS19355: BWI76_RS19355 - LacI family transcriptional regulator, at 4,033,444 to 4,034,445 _RS19355 BWI76_RS19360: BWI76_RS19360 - glucose dehydrogenase, at 4,034,702 to 4,035,451 _RS19360 Position (kb) 4033 4034 4035Strain fitness (log2 ratio) -2 -1 0 1at 4033.038 kb on - strand, within BWI76_RS19350at 4033.353 kb on + strandat 4033.604 kb on - strand, within BWI76_RS19355at 4034.000 kb on + strand, within BWI76_RS19355at 4034.605 kb on + strandat 4034.780 kb on + strand, within BWI76_RS19360at 4035.032 kb on + strand, within BWI76_RS19360at 4035.175 kb on + strand, within BWI76_RS19360at 4035.175 kb on + strand, within BWI76_RS19360at 4035.425 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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4,033,038 - BWI76_RS19350 0.59 +0.2
4,033,353 + +0.1
4,033,604 - BWI76_RS19355 0.16 -0.6
4,034,000 + BWI76_RS19355 0.55 -1.6
4,034,605 + +0.4
4,034,780 + BWI76_RS19360 0.10 +0.9
4,035,032 + BWI76_RS19360 0.44 -0.6
4,035,175 + BWI76_RS19360 0.63 -2.1
4,035,175 + BWI76_RS19360 0.63 +1.3
4,035,425 - +1.7

Or see this region's nucleotide sequence