Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18980 and BWI76_RS18985 are separated by 13 nucleotides BWI76_RS18985 and BWI76_RS18990 overlap by 1 nucleotides
BWI76_RS18980: BWI76_RS18980 - glycosyl transferase, at 3,936,388 to 3,938,280
_RS18980
BWI76_RS18985: BWI76_RS18985 - LPS O-antigen ABC transporter ATP-binding protein, at 3,938,294 to 3,939,034
_RS18985
BWI76_RS18990: BWI76_RS18990 - ABC transporter permease, at 3,939,034 to 3,939,801
_RS18990
Position (kb)
3938
3939
3940 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3937.296 kb on - strand, within BWI76_RS18980 at 3937.296 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.297 kb on - strand, within BWI76_RS18980 at 3937.307 kb on - strand, within BWI76_RS18980 at 3937.312 kb on - strand, within BWI76_RS18980 at 3937.312 kb on - strand, within BWI76_RS18980 at 3937.394 kb on - strand, within BWI76_RS18980 at 3937.394 kb on - strand, within BWI76_RS18980 at 3937.394 kb on - strand, within BWI76_RS18980 at 3937.394 kb on - strand, within BWI76_RS18980 at 3937.404 kb on - strand, within BWI76_RS18980 at 3937.423 kb on + strand, within BWI76_RS18980 at 3937.452 kb on - strand, within BWI76_RS18980 at 3937.454 kb on + strand, within BWI76_RS18980 at 3937.455 kb on + strand, within BWI76_RS18980 at 3937.474 kb on - strand, within BWI76_RS18980 at 3937.489 kb on + strand, within BWI76_RS18980 at 3937.489 kb on - strand, within BWI76_RS18980 at 3937.497 kb on - strand, within BWI76_RS18980 at 3937.508 kb on - strand, within BWI76_RS18980 at 3937.508 kb on - strand, within BWI76_RS18980 at 3937.589 kb on - strand, within BWI76_RS18980 at 3937.659 kb on - strand, within BWI76_RS18980 at 3937.679 kb on - strand, within BWI76_RS18980 at 3937.679 kb on - strand, within BWI76_RS18980 at 3937.726 kb on + strand, within BWI76_RS18980 at 3937.747 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.780 kb on - strand, within BWI76_RS18980 at 3937.792 kb on - strand, within BWI76_RS18980 at 3937.800 kb on - strand, within BWI76_RS18980 at 3937.800 kb on - strand, within BWI76_RS18980 at 3937.813 kb on - strand, within BWI76_RS18980 at 3937.874 kb on - strand, within BWI76_RS18980 at 3937.893 kb on - strand, within BWI76_RS18980 at 3937.900 kb on - strand, within BWI76_RS18980 at 3937.905 kb on - strand, within BWI76_RS18980 at 3937.905 kb on - strand, within BWI76_RS18980 at 3937.905 kb on - strand, within BWI76_RS18980 at 3937.905 kb on - strand, within BWI76_RS18980 at 3937.919 kb on - strand, within BWI76_RS18980 at 3937.919 kb on - strand, within BWI76_RS18980 at 3937.961 kb on - strand, within BWI76_RS18980 at 3938.022 kb on - strand, within BWI76_RS18980 at 3938.022 kb on - strand, within BWI76_RS18980 at 3938.168 kb on - strand at 3938.186 kb on - strand at 3938.186 kb on - strand at 3938.188 kb on - strand at 3938.192 kb on + strand at 3938.193 kb on - strand at 3938.200 kb on - strand at 3938.200 kb on - strand at 3938.200 kb on - strand at 3938.200 kb on - strand at 3938.233 kb on - strand at 3938.245 kb on - strand at 3938.250 kb on - strand at 3938.266 kb on - strand at 3938.273 kb on - strand at 3938.408 kb on - strand, within BWI76_RS18985 at 3938.411 kb on - strand, within BWI76_RS18985 at 3938.415 kb on - strand, within BWI76_RS18985 at 3938.425 kb on + strand, within BWI76_RS18985 at 3938.458 kb on - strand, within BWI76_RS18985 at 3938.459 kb on - strand, within BWI76_RS18985 at 3938.459 kb on - strand, within BWI76_RS18985 at 3938.583 kb on - strand, within BWI76_RS18985 at 3938.594 kb on - strand, within BWI76_RS18985 at 3938.619 kb on - strand, within BWI76_RS18985 at 3938.666 kb on - strand, within BWI76_RS18985 at 3938.674 kb on - strand, within BWI76_RS18985 at 3938.755 kb on - strand, within BWI76_RS18985 at 3938.755 kb on - strand, within BWI76_RS18985 at 3938.770 kb on - strand, within BWI76_RS18985 at 3938.798 kb on - strand, within BWI76_RS18985 at 3938.828 kb on - strand, within BWI76_RS18985 at 3938.833 kb on - strand, within BWI76_RS18985 at 3938.833 kb on - strand, within BWI76_RS18985 at 3938.833 kb on - strand, within BWI76_RS18985 at 3938.848 kb on - strand, within BWI76_RS18985 at 3938.848 kb on - strand, within BWI76_RS18985 at 3938.852 kb on - strand, within BWI76_RS18985 at 3938.852 kb on - strand, within BWI76_RS18985 at 3938.869 kb on - strand, within BWI76_RS18985 at 3938.869 kb on - strand, within BWI76_RS18985 at 3938.870 kb on - strand, within BWI76_RS18985 at 3938.870 kb on - strand, within BWI76_RS18985 at 3938.870 kb on - strand, within BWI76_RS18985 at 3938.870 kb on - strand, within BWI76_RS18985 at 3938.874 kb on - strand, within BWI76_RS18985 at 3938.876 kb on - strand, within BWI76_RS18985 at 3938.876 kb on - strand, within BWI76_RS18985 at 3938.876 kb on - strand, within BWI76_RS18985 at 3938.876 kb on - strand, within BWI76_RS18985 at 3938.876 kb on - strand, within BWI76_RS18985 at 3938.923 kb on - strand, within BWI76_RS18985 at 3938.945 kb on - strand, within BWI76_RS18985 at 3938.974 kb on - strand at 3939.040 kb on - strand at 3939.043 kb on - strand at 3939.099 kb on - strand at 3939.104 kb on - strand at 3939.118 kb on - strand, within BWI76_RS18990 at 3939.120 kb on - strand, within BWI76_RS18990 at 3939.120 kb on - strand, within BWI76_RS18990 at 3939.120 kb on - strand, within BWI76_RS18990 at 3939.192 kb on - strand, within BWI76_RS18990 at 3939.193 kb on - strand, within BWI76_RS18990 at 3939.193 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.199 kb on - strand, within BWI76_RS18990 at 3939.209 kb on - strand, within BWI76_RS18990 at 3939.266 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand, within BWI76_RS18990 at 3939.278 kb on - strand at 3939.357 kb on - strand, within BWI76_RS18990 at 3939.358 kb on - strand, within BWI76_RS18990 at 3939.379 kb on - strand, within BWI76_RS18990 at 3939.393 kb on - strand, within BWI76_RS18990 at 3939.394 kb on - strand, within BWI76_RS18990 at 3939.394 kb on - strand, within BWI76_RS18990 at 3939.394 kb on - strand, within BWI76_RS18990 at 3939.394 kb on - strand, within BWI76_RS18990 at 3939.418 kb on - strand, within BWI76_RS18990 at 3939.423 kb on - strand, within BWI76_RS18990 at 3939.460 kb on - strand, within BWI76_RS18990 at 3939.460 kb on - strand, within BWI76_RS18990 at 3939.460 kb on - strand, within BWI76_RS18990 at 3939.460 kb on - strand, within BWI76_RS18990 at 3939.460 kb on - strand, within BWI76_RS18990 at 3939.471 kb on - strand, within BWI76_RS18990 at 3939.488 kb on - strand, within BWI76_RS18990 at 3939.584 kb on - strand, within BWI76_RS18990 at 3939.591 kb on - strand, within BWI76_RS18990 at 3939.594 kb on - strand, within BWI76_RS18990 at 3939.594 kb on - strand, within BWI76_RS18990 at 3939.746 kb on - strand at 3939.747 kb on - strand at 3939.836 kb on + strand at 3939.844 kb on - strand at 3939.844 kb on - strand at 3939.844 kb on - strand at 3939.849 kb on - strand at 3939.849 kb on - strand at 3939.849 kb on - strand at 3939.849 kb on - strand at 3939.851 kb on - strand at 3939.851 kb on - strand at 3939.859 kb on - strand at 3939.900 kb on - strand at 3939.905 kb on - strand at 3939.912 kb on + strand at 3939.913 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.918 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.920 kb on - strand at 3939.928 kb on - strand at 3939.946 kb on - strand at 3939.973 kb on + strand at 3939.974 kb on - strand at 3939.974 kb on - strand at 3939.986 kb on - strand at 3940.006 kb on + strand at 3940.014 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 3,937,296 - BWI76_RS18980 0.48 +1.6 3,937,296 - BWI76_RS18980 0.48 +0.0 3,937,297 - BWI76_RS18980 0.48 +0.9 3,937,297 - BWI76_RS18980 0.48 +0.9 3,937,297 - BWI76_RS18980 0.48 +0.8 3,937,297 - BWI76_RS18980 0.48 +0.1 3,937,297 - BWI76_RS18980 0.48 +0.8 3,937,297 - BWI76_RS18980 0.48 +1.4 3,937,297 - BWI76_RS18980 0.48 +1.1 3,937,297 - BWI76_RS18980 0.48 -0.1 3,937,297 - BWI76_RS18980 0.48 +1.0 3,937,297 - BWI76_RS18980 0.48 +0.6 3,937,307 - BWI76_RS18980 0.49 -0.4 3,937,312 - BWI76_RS18980 0.49 +0.3 3,937,312 - BWI76_RS18980 0.49 +0.5 3,937,394 - BWI76_RS18980 0.53 -1.1 3,937,394 - BWI76_RS18980 0.53 +0.8 3,937,394 - BWI76_RS18980 0.53 +2.0 3,937,394 - BWI76_RS18980 0.53 +1.0 3,937,404 - BWI76_RS18980 0.54 +1.4 3,937,423 + BWI76_RS18980 0.55 +2.1 3,937,452 - BWI76_RS18980 0.56 +0.7 3,937,454 + BWI76_RS18980 0.56 +0.8 3,937,455 + BWI76_RS18980 0.56 +2.4 3,937,474 - BWI76_RS18980 0.57 +0.9 3,937,489 + BWI76_RS18980 0.58 +2.1 3,937,489 - BWI76_RS18980 0.58 +1.6 3,937,497 - BWI76_RS18980 0.59 +1.2 3,937,508 - BWI76_RS18980 0.59 +0.6 3,937,508 - BWI76_RS18980 0.59 +0.3 3,937,589 - BWI76_RS18980 0.63 +1.5 3,937,659 - BWI76_RS18980 0.67 +0.7 3,937,679 - BWI76_RS18980 0.68 +1.9 3,937,679 - BWI76_RS18980 0.68 +1.3 3,937,726 + BWI76_RS18980 0.71 +0.3 3,937,747 - BWI76_RS18980 0.72 +1.7 3,937,780 - BWI76_RS18980 0.74 +0.0 3,937,780 - BWI76_RS18980 0.74 +0.6 3,937,780 - BWI76_RS18980 0.74 +0.3 3,937,780 - BWI76_RS18980 0.74 +1.4 3,937,780 - BWI76_RS18980 0.74 +0.3 3,937,780 - BWI76_RS18980 0.74 +1.6 3,937,792 - BWI76_RS18980 0.74 -1.0 3,937,800 - BWI76_RS18980 0.75 -0.6 3,937,800 - BWI76_RS18980 0.75 +1.2 3,937,813 - BWI76_RS18980 0.75 -1.1 3,937,874 - BWI76_RS18980 0.78 -0.1 3,937,893 - BWI76_RS18980 0.80 +0.5 3,937,900 - BWI76_RS18980 0.80 +2.3 3,937,905 - BWI76_RS18980 0.80 -0.6 3,937,905 - BWI76_RS18980 0.80 +1.5 3,937,905 - BWI76_RS18980 0.80 +1.1 3,937,905 - BWI76_RS18980 0.80 +0.8 3,937,919 - BWI76_RS18980 0.81 +0.5 3,937,919 - BWI76_RS18980 0.81 -0.3 3,937,961 - BWI76_RS18980 0.83 +0.7 3,938,022 - BWI76_RS18980 0.86 +0.6 3,938,022 - BWI76_RS18980 0.86 +1.3 3,938,168 - +0.9 3,938,186 - -0.2 3,938,186 - +0.2 3,938,188 - +0.7 3,938,192 + +0.3 3,938,193 - +1.1 3,938,200 - +0.2 3,938,200 - -0.5 3,938,200 - +1.4 3,938,200 - +0.6 3,938,233 - +0.6 3,938,245 - +0.2 3,938,250 - +0.3 3,938,266 - +1.5 3,938,273 - +0.5 3,938,408 - BWI76_RS18985 0.15 +0.6 3,938,411 - BWI76_RS18985 0.16 +0.5 3,938,415 - BWI76_RS18985 0.16 +0.3 3,938,425 + BWI76_RS18985 0.18 +1.4 3,938,458 - BWI76_RS18985 0.22 -0.6 3,938,459 - BWI76_RS18985 0.22 -0.5 3,938,459 - BWI76_RS18985 0.22 +0.6 3,938,583 - BWI76_RS18985 0.39 +1.2 3,938,594 - BWI76_RS18985 0.40 +1.4 3,938,619 - BWI76_RS18985 0.44 +1.1 3,938,666 - BWI76_RS18985 0.50 +0.9 3,938,674 - BWI76_RS18985 0.51 +0.7 3,938,755 - BWI76_RS18985 0.62 +0.6 3,938,755 - BWI76_RS18985 0.62 +0.3 3,938,770 - BWI76_RS18985 0.64 +1.1 3,938,798 - BWI76_RS18985 0.68 +1.3 3,938,828 - BWI76_RS18985 0.72 -0.7 3,938,833 - BWI76_RS18985 0.73 +0.9 3,938,833 - BWI76_RS18985 0.73 +1.2 3,938,833 - BWI76_RS18985 0.73 +0.8 3,938,848 - BWI76_RS18985 0.75 -1.2 3,938,848 - BWI76_RS18985 0.75 +0.7 3,938,852 - BWI76_RS18985 0.75 +1.0 3,938,852 - BWI76_RS18985 0.75 -0.7 3,938,869 - BWI76_RS18985 0.78 +0.9 3,938,869 - BWI76_RS18985 0.78 -0.7 3,938,870 - BWI76_RS18985 0.78 +1.6 3,938,870 - BWI76_RS18985 0.78 -0.4 3,938,870 - BWI76_RS18985 0.78 +1.5 3,938,870 - BWI76_RS18985 0.78 +0.7 3,938,874 - BWI76_RS18985 0.78 +1.0 3,938,876 - BWI76_RS18985 0.79 +0.9 3,938,876 - BWI76_RS18985 0.79 +0.1 3,938,876 - BWI76_RS18985 0.79 +0.8 3,938,876 - BWI76_RS18985 0.79 +0.5 3,938,876 - BWI76_RS18985 0.79 +1.4 3,938,923 - BWI76_RS18985 0.85 +0.3 3,938,945 - BWI76_RS18985 0.88 +0.1 3,938,974 - +0.7 3,939,040 - +0.1 3,939,043 - +1.2 3,939,099 - -0.9 3,939,104 - +0.8 3,939,118 - BWI76_RS18990 0.11 +1.3 3,939,120 - BWI76_RS18990 0.11 +0.4 3,939,120 - BWI76_RS18990 0.11 +0.4 3,939,120 - BWI76_RS18990 0.11 +1.4 3,939,192 - BWI76_RS18990 0.21 +0.6 3,939,193 - BWI76_RS18990 0.21 +0.8 3,939,193 - BWI76_RS18990 0.21 +0.9 3,939,199 - BWI76_RS18990 0.21 +1.5 3,939,199 - BWI76_RS18990 0.21 +1.0 3,939,199 - BWI76_RS18990 0.21 +0.3 3,939,199 - BWI76_RS18990 0.21 -1.3 3,939,199 - BWI76_RS18990 0.21 +1.0 3,939,199 - BWI76_RS18990 0.21 +1.4 3,939,199 - BWI76_RS18990 0.21 +0.7 3,939,199 - BWI76_RS18990 0.21 +0.8 3,939,209 - BWI76_RS18990 0.23 +0.8 3,939,266 - BWI76_RS18990 0.30 +1.2 3,939,278 - BWI76_RS18990 0.32 +0.4 3,939,278 - BWI76_RS18990 0.32 +1.6 3,939,278 - BWI76_RS18990 0.32 +1.9 3,939,278 - BWI76_RS18990 0.32 -1.7 3,939,278 - BWI76_RS18990 0.32 +2.5 3,939,278 - BWI76_RS18990 0.32 +0.2 3,939,278 - BWI76_RS18990 0.32 +0.6 3,939,278 - +1.6 3,939,357 - BWI76_RS18990 0.42 +0.4 3,939,358 - BWI76_RS18990 0.42 +0.8 3,939,379 - BWI76_RS18990 0.45 +0.8 3,939,393 - BWI76_RS18990 0.47 +2.0 3,939,394 - BWI76_RS18990 0.47 +0.7 3,939,394 - BWI76_RS18990 0.47 -1.3 3,939,394 - BWI76_RS18990 0.47 -1.4 3,939,394 - BWI76_RS18990 0.47 +0.5 3,939,418 - BWI76_RS18990 0.50 +0.9 3,939,423 - BWI76_RS18990 0.51 +0.5 3,939,460 - BWI76_RS18990 0.55 +1.9 3,939,460 - BWI76_RS18990 0.55 +0.7 3,939,460 - BWI76_RS18990 0.55 +0.3 3,939,460 - BWI76_RS18990 0.55 +0.4 3,939,460 - BWI76_RS18990 0.55 +1.4 3,939,471 - BWI76_RS18990 0.57 -0.3 3,939,488 - BWI76_RS18990 0.59 -0.0 3,939,584 - BWI76_RS18990 0.72 +0.4 3,939,591 - BWI76_RS18990 0.73 +0.7 3,939,594 - BWI76_RS18990 0.73 +0.5 3,939,594 - BWI76_RS18990 0.73 +0.0 3,939,746 - +1.4 3,939,747 - +1.1 3,939,836 + -0.7 3,939,844 - +0.9 3,939,844 - -0.4 3,939,844 - +0.0 3,939,849 - +0.6 3,939,849 - -0.9 3,939,849 - +0.1 3,939,849 - +1.8 3,939,851 - +0.4 3,939,851 - +1.0 3,939,859 - -0.5 3,939,900 - +0.3 3,939,905 - -0.4 3,939,912 + +0.6 3,939,913 - +0.3 3,939,918 - -1.3 3,939,918 - +0.4 3,939,918 - +0.2 3,939,918 - -0.3 3,939,918 - +0.4 3,939,918 - -0.0 3,939,918 - +0.4 3,939,918 - -0.4 3,939,918 - -0.1 3,939,918 - +0.1 3,939,918 - -0.0 3,939,918 - +0.6 3,939,918 - -2.1 3,939,918 - -1.4 3,939,918 - -0.9 3,939,920 - +0.1 3,939,920 - +0.1 3,939,920 - -0.5 3,939,920 - -1.3 3,939,920 - -1.3 3,939,920 - +0.1 3,939,920 - +0.9 3,939,920 - +0.1 3,939,928 - -0.2 3,939,946 - +1.0 3,939,973 + +0.8 3,939,974 - -0.9 3,939,974 - +0.6 3,939,986 - -0.1 3,940,006 + -0.7 3,940,014 - +0.1
Or see this region's nucleotide sequence