Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14615

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14610 and BWI76_RS14615 are separated by 13 nucleotidesBWI76_RS14615 and BWI76_RS14620 overlap by 1 nucleotides BWI76_RS14610: BWI76_RS14610 - putative hydrolase, at 3,066,465 to 3,067,544 _RS14610 BWI76_RS14615: BWI76_RS14615 - hypothetical protein, at 3,067,558 to 3,068,313 _RS14615 BWI76_RS14620: BWI76_RS14620 - acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase, at 3,068,313 to 3,069,425 _RS14620 Position (kb) 3067 3068 3069Strain fitness (log2 ratio) -3 -2 -1 0 1at 3066.900 kb on + strand, within BWI76_RS14610at 3067.185 kb on - strand, within BWI76_RS14610at 3067.315 kb on - strand, within BWI76_RS14610at 3067.504 kb on - strandat 3067.587 kb on + strandat 3067.587 kb on + strandat 3067.595 kb on - strandat 3067.796 kb on + strand, within BWI76_RS14615at 3068.897 kb on + strand, within BWI76_RS14620

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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3,066,900 + BWI76_RS14610 0.40 -0.4
3,067,185 - BWI76_RS14610 0.67 -1.2
3,067,315 - BWI76_RS14610 0.79 -1.3
3,067,504 - -0.1
3,067,587 + +0.2
3,067,587 + -0.2
3,067,595 - +1.0
3,067,796 + BWI76_RS14615 0.31 -3.1
3,068,897 + BWI76_RS14620 0.52 +0.1

Or see this region's nucleotide sequence