Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07705 and BWI76_RS07710 are separated by 27 nucleotides BWI76_RS07710 and BWI76_RS07715 are separated by 10 nucleotides BWI76_RS07715 and BWI76_RS07720 are separated by 85 nucleotides BWI76_RS07720 and BWI76_RS07725 overlap by 4 nucleotides
BWI76_RS07705: BWI76_RS07705 - enterochelin esterase, at 1,632,362 to 1,633,561
_RS07705
BWI76_RS07710: BWI76_RS07710 - invasin-like protein, at 1,633,589 to 1,633,792
_RS07710
BWI76_RS07715: BWI76_RS07715 - non-ribosomal peptide synthetase, at 1,633,803 to 1,637,690
_RS07715
BWI76_RS07720: BWI76_RS07720 - iron-enterobactin transporter ATP-binding protein, at 1,637,776 to 1,638,570
_RS07720
BWI76_RS07725: BWI76_RS07725 - iron-enterobactin transporter permease, at 1,638,567 to 1,639,559
_RS07725
Position (kb)
1633
1634
1635
1636
1637
1638 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1632.875 kb on - strand, within BWI76_RS07705 at 1632.971 kb on + strand, within BWI76_RS07705 at 1633.541 kb on + strand at 1633.763 kb on + strand, within BWI76_RS07710 at 1633.763 kb on + strand, within BWI76_RS07710 at 1633.763 kb on + strand, within BWI76_RS07710 at 1633.897 kb on + strand at 1633.905 kb on - strand at 1633.972 kb on + strand at 1633.980 kb on - strand at 1634.061 kb on - strand at 1634.158 kb on + strand at 1634.397 kb on + strand, within BWI76_RS07715 at 1634.410 kb on - strand, within BWI76_RS07715 at 1634.558 kb on - strand, within BWI76_RS07715 at 1634.877 kb on + strand, within BWI76_RS07715 at 1634.999 kb on + strand, within BWI76_RS07715 at 1635.222 kb on - strand, within BWI76_RS07715 at 1635.739 kb on + strand, within BWI76_RS07715 at 1635.802 kb on - strand, within BWI76_RS07715 at 1636.142 kb on - strand, within BWI76_RS07715 at 1636.209 kb on - strand, within BWI76_RS07715 at 1636.232 kb on + strand, within BWI76_RS07715 at 1636.240 kb on - strand, within BWI76_RS07715 at 1636.259 kb on - strand, within BWI76_RS07715 at 1636.334 kb on + strand, within BWI76_RS07715 at 1637.073 kb on - strand, within BWI76_RS07715 at 1637.606 kb on + strand at 1637.754 kb on + strand at 1638.416 kb on - strand, within BWI76_RS07720 at 1638.551 kb on + strand at 1638.661 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,632,875 - BWI76_RS07705 0.43 -2.5 1,632,971 + BWI76_RS07705 0.51 +0.8 1,633,541 + -1.1 1,633,763 + BWI76_RS07710 0.85 +0.5 1,633,763 + BWI76_RS07710 0.85 +0.7 1,633,763 + BWI76_RS07710 0.85 +0.4 1,633,897 + -0.6 1,633,905 - +0.9 1,633,972 + +0.7 1,633,980 - +1.0 1,634,061 - +0.7 1,634,158 + +1.1 1,634,397 + BWI76_RS07715 0.15 +0.7 1,634,410 - BWI76_RS07715 0.16 +0.5 1,634,558 - BWI76_RS07715 0.19 +1.4 1,634,877 + BWI76_RS07715 0.28 +1.4 1,634,999 + BWI76_RS07715 0.31 +2.0 1,635,222 - BWI76_RS07715 0.36 +1.0 1,635,739 + BWI76_RS07715 0.50 +0.8 1,635,802 - BWI76_RS07715 0.51 +0.3 1,636,142 - BWI76_RS07715 0.60 +1.2 1,636,209 - BWI76_RS07715 0.62 +0.4 1,636,232 + BWI76_RS07715 0.62 -1.3 1,636,240 - BWI76_RS07715 0.63 +0.5 1,636,259 - BWI76_RS07715 0.63 +0.6 1,636,334 + BWI76_RS07715 0.65 +3.7 1,637,073 - BWI76_RS07715 0.84 +1.9 1,637,606 + +1.2 1,637,754 + -1.2 1,638,416 - BWI76_RS07720 0.81 +5.7 1,638,551 + +4.9 1,638,661 + +4.9
Or see this region's nucleotide sequence