Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06320 and BWI76_RS06325 are separated by 64 nucleotides BWI76_RS06325 and BWI76_RS06330 are separated by 148 nucleotides BWI76_RS06330 and BWI76_RS06335 are separated by 45 nucleotides
BWI76_RS06320: BWI76_RS06320 - Xaa-Pro aminopeptidase, at 1,330,591 to 1,331,982
_RS06320
BWI76_RS06325: BWI76_RS06325 - hypothetical protein, at 1,332,047 to 1,332,424
_RS06325
BWI76_RS06330: BWI76_RS06330 - DNA-binding transcriptional regulator, at 1,332,573 to 1,333,262
_RS06330
BWI76_RS06335: BWI76_RS06335 - nucleoside-specific channel-forming protein Tsx, at 1,333,308 to 1,334,192
_RS06335
Position (kb)
1332
1333
1334 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1331.734 kb on + strand, within BWI76_RS06320 at 1331.830 kb on - strand, within BWI76_RS06320 at 1331.994 kb on + strand at 1332.002 kb on - strand at 1332.004 kb on + strand at 1332.004 kb on + strand at 1332.012 kb on - strand at 1332.012 kb on - strand at 1332.064 kb on - strand at 1332.064 kb on - strand at 1332.083 kb on + strand at 1332.223 kb on + strand, within BWI76_RS06325 at 1332.231 kb on + strand, within BWI76_RS06325 at 1332.231 kb on - strand, within BWI76_RS06325 at 1332.762 kb on + strand, within BWI76_RS06330 at 1332.953 kb on + strand, within BWI76_RS06330 at 1333.131 kb on - strand, within BWI76_RS06330 at 1333.395 kb on + strand at 1333.451 kb on - strand, within BWI76_RS06335 at 1333.461 kb on - strand, within BWI76_RS06335 at 1333.544 kb on + strand, within BWI76_RS06335 at 1333.544 kb on + strand, within BWI76_RS06335 at 1333.751 kb on - strand, within BWI76_RS06335 at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.154 kb on + strand at 1334.205 kb on + strand at 1334.213 kb on - strand at 1334.217 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 1,331,734 + BWI76_RS06320 0.82 +0.5 1,331,830 - BWI76_RS06320 0.89 -0.0 1,331,994 + -0.4 1,332,002 - -0.0 1,332,004 + -0.3 1,332,004 + +0.6 1,332,012 - -0.5 1,332,012 - -0.9 1,332,064 - -1.3 1,332,064 - -0.4 1,332,083 + +0.3 1,332,223 + BWI76_RS06325 0.47 -0.1 1,332,231 + BWI76_RS06325 0.49 +1.0 1,332,231 - BWI76_RS06325 0.49 +1.3 1,332,762 + BWI76_RS06330 0.27 -1.3 1,332,953 + BWI76_RS06330 0.55 -2.2 1,333,131 - BWI76_RS06330 0.81 -0.9 1,333,395 + -0.7 1,333,451 - BWI76_RS06335 0.16 -0.4 1,333,461 - BWI76_RS06335 0.17 +0.0 1,333,544 + BWI76_RS06335 0.27 +0.9 1,333,544 + BWI76_RS06335 0.27 +1.2 1,333,751 - BWI76_RS06335 0.50 +0.0 1,334,154 + +0.9 1,334,154 + -0.5 1,334,154 + +0.1 1,334,154 + -0.2 1,334,154 + +0.6 1,334,205 + +0.7 1,334,213 - +0.2 1,334,217 + -3.1
Or see this region's nucleotide sequence