Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03010 and BWI76_RS03015 are separated by 164 nucleotides BWI76_RS03015 and BWI76_RS03020 are separated by 52 nucleotides BWI76_RS03020 and BWI76_RS03025 are separated by 99 nucleotides
BWI76_RS03010: BWI76_RS03010 - ornithine carbamoyltransferase, at 615,898 to 616,902
_RS03010
BWI76_RS03015: BWI76_RS03015 - RNase E inhibitor protein, at 617,067 to 617,492
_RS03015
BWI76_RS03020: BWI76_RS03020 - tRNA hydroxylase, at 617,545 to 618,303
_RS03020
BWI76_RS03025: BWI76_RS03025 - N-acetyltransferase, at 618,403 to 618,906
_RS03025
Position (kb) 617
618 Strain fitness (log2 ratio) -2
-1
0
1
2 at 616.124 kb on - strand, within BWI76_RS03010 at 616.214 kb on - strand, within BWI76_RS03010 at 616.216 kb on + strand, within BWI76_RS03010 at 616.224 kb on - strand, within BWI76_RS03010 at 616.361 kb on - strand, within BWI76_RS03010 at 616.361 kb on - strand, within BWI76_RS03010 at 616.388 kb on + strand, within BWI76_RS03010 at 616.423 kb on + strand, within BWI76_RS03010 at 616.431 kb on - strand, within BWI76_RS03010 at 616.480 kb on - strand, within BWI76_RS03010 at 616.480 kb on - strand, within BWI76_RS03010 at 616.489 kb on + strand, within BWI76_RS03010 at 616.507 kb on - strand, within BWI76_RS03010 at 616.530 kb on + strand, within BWI76_RS03010 at 616.695 kb on + strand, within BWI76_RS03010 at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.808 kb on + strand at 616.816 kb on - strand at 616.844 kb on - strand at 616.906 kb on - strand at 617.167 kb on - strand, within BWI76_RS03015 at 617.323 kb on + strand, within BWI76_RS03015 at 617.607 kb on - strand at 617.654 kb on - strand, within BWI76_RS03020 at 617.665 kb on - strand, within BWI76_RS03020 at 617.665 kb on - strand, within BWI76_RS03020 at 617.761 kb on - strand, within BWI76_RS03020 at 617.995 kb on - strand, within BWI76_RS03020 at 617.995 kb on - strand, within BWI76_RS03020 at 618.331 kb on - strand at 618.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 616,124 - BWI76_RS03010 0.22 -0.1 616,214 - BWI76_RS03010 0.31 +0.3 616,216 + BWI76_RS03010 0.32 +0.7 616,224 - BWI76_RS03010 0.32 +2.1 616,361 - BWI76_RS03010 0.46 +0.0 616,361 - BWI76_RS03010 0.46 -0.2 616,388 + BWI76_RS03010 0.49 -1.2 616,423 + BWI76_RS03010 0.52 -0.0 616,431 - BWI76_RS03010 0.53 -0.8 616,480 - BWI76_RS03010 0.58 -1.9 616,480 - BWI76_RS03010 0.58 -0.2 616,489 + BWI76_RS03010 0.59 -0.2 616,507 - BWI76_RS03010 0.61 -0.3 616,530 + BWI76_RS03010 0.63 -0.8 616,695 + BWI76_RS03010 0.79 -0.0 616,808 + +1.5 616,808 + -1.1 616,808 + -0.4 616,808 + -0.7 616,808 + +0.1 616,816 - -0.3 616,844 - -0.1 616,906 - -0.7 617,167 - BWI76_RS03015 0.23 -1.1 617,323 + BWI76_RS03015 0.60 -1.8 617,607 - +0.4 617,654 - BWI76_RS03020 0.14 -0.2 617,665 - BWI76_RS03020 0.16 -1.4 617,665 - BWI76_RS03020 0.16 -2.5 617,761 - BWI76_RS03020 0.28 +0.5 617,995 - BWI76_RS03020 0.59 +0.1 617,995 - BWI76_RS03020 0.59 +0.3 618,331 - +0.8 618,410 + +0.2
Or see this region's nucleotide sequence