Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS02480

Experiment: Paraquat dichloride 0.1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS02475 and BWI76_RS02480 are separated by 94 nucleotidesBWI76_RS02480 and BWI76_RS02485 are separated by 41 nucleotides BWI76_RS02475: BWI76_RS02475 - ribosome small subunit-dependent GTPase, at 509,237 to 510,298 _RS02475 BWI76_RS02480: BWI76_RS02480 - oligoribonuclease, at 510,393 to 510,938 _RS02480 BWI76_RS02485: BWI76_RS02485 - polar amino acid ABC transporter (PAAT) family, periplasmic amino acid-binding protein, at 510,980 to 511,711 _RS02485 Position (kb) 510 511Strain fitness (log2 ratio) -2 -1 0 1at 510.951 kb on + strandat 511.044 kb on + strandat 511.044 kb on + strandat 511.152 kb on + strand, within BWI76_RS02485at 511.186 kb on - strand, within BWI76_RS02485at 511.349 kb on + strand, within BWI76_RS02485at 511.357 kb on - strand, within BWI76_RS02485at 511.388 kb on - strand, within BWI76_RS02485at 511.481 kb on + strand, within BWI76_RS02485at 511.488 kb on + strand, within BWI76_RS02485at 511.550 kb on - strand, within BWI76_RS02485at 511.559 kb on + strand, within BWI76_RS02485

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml
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510,951 + -0.6
511,044 + -1.8
511,044 + -0.3
511,152 + BWI76_RS02485 0.23 -1.0
511,186 - BWI76_RS02485 0.28 -0.7
511,349 + BWI76_RS02485 0.50 -1.4
511,357 - BWI76_RS02485 0.52 -0.2
511,388 - BWI76_RS02485 0.56 -0.6
511,481 + BWI76_RS02485 0.68 -0.8
511,488 + BWI76_RS02485 0.69 +0.9
511,550 - BWI76_RS02485 0.78 +0.4
511,559 + BWI76_RS02485 0.79 -0.3

Or see this region's nucleotide sequence