Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00810 and BWI76_RS00815 are separated by 138 nucleotides BWI76_RS00815 and BWI76_RS00820 are separated by 56 nucleotides BWI76_RS00820 and BWI76_RS00825 are separated by 205 nucleotides
BWI76_RS00810: BWI76_RS00810 - DeoR family transcriptional regulator, at 166,003 to 166,752
_RS00810
BWI76_RS00815: BWI76_RS00815 - glycerol dehydrogenase, at 166,891 to 167,994
_RS00815
BWI76_RS00820: BWI76_RS00820 - fructose-6-phosphate aldolase, at 168,051 to 168,713
_RS00820
BWI76_RS00825: BWI76_RS00825 - AraC family transcriptional regulator, at 168,919 to 169,782
_RS00825
Position (kb) 166
167
168 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 165.914 kb on + strand at 166.001 kb on + strand at 166.009 kb on - strand at 166.009 kb on - strand at 166.068 kb on - strand at 166.095 kb on + strand, within BWI76_RS00810 at 166.204 kb on - strand, within BWI76_RS00810 at 166.254 kb on + strand, within BWI76_RS00810 at 166.262 kb on - strand, within BWI76_RS00810 at 166.293 kb on - strand, within BWI76_RS00810 at 166.346 kb on - strand, within BWI76_RS00810 at 166.447 kb on - strand, within BWI76_RS00810 at 166.704 kb on + strand at 166.704 kb on + strand at 166.826 kb on + strand at 166.827 kb on + strand at 166.954 kb on - strand at 166.954 kb on - strand at 167.100 kb on + strand, within BWI76_RS00815 at 167.207 kb on + strand, within BWI76_RS00815 at 167.221 kb on + strand, within BWI76_RS00815 at 167.285 kb on - strand, within BWI76_RS00815 at 167.510 kb on + strand, within BWI76_RS00815 at 167.640 kb on + strand, within BWI76_RS00815 at 167.735 kb on + strand, within BWI76_RS00815 at 167.743 kb on - strand, within BWI76_RS00815 at 167.896 kb on - strand at 168.079 kb on + strand at 168.079 kb on + strand at 168.096 kb on + strand at 168.189 kb on + strand, within BWI76_RS00820 at 168.297 kb on + strand, within BWI76_RS00820 at 168.305 kb on - strand, within BWI76_RS00820 at 168.384 kb on - strand, within BWI76_RS00820 at 168.395 kb on + strand, within BWI76_RS00820 at 168.481 kb on + strand, within BWI76_RS00820 at 168.590 kb on - strand, within BWI76_RS00820 at 168.742 kb on + strand at 168.848 kb on + strand at 168.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 165,914 + -0.6 166,001 + +1.4 166,009 - +0.7 166,009 - -1.5 166,068 - -1.3 166,095 + BWI76_RS00810 0.12 +2.0 166,204 - BWI76_RS00810 0.27 -0.7 166,254 + BWI76_RS00810 0.33 -0.4 166,262 - BWI76_RS00810 0.35 -0.4 166,293 - BWI76_RS00810 0.39 -1.1 166,346 - BWI76_RS00810 0.46 -0.4 166,447 - BWI76_RS00810 0.59 -1.5 166,704 + +0.5 166,704 + -2.3 166,826 + +0.3 166,827 + -2.9 166,954 - -1.1 166,954 - +0.5 167,100 + BWI76_RS00815 0.19 -0.2 167,207 + BWI76_RS00815 0.29 -0.7 167,221 + BWI76_RS00815 0.30 +0.2 167,285 - BWI76_RS00815 0.36 +0.0 167,510 + BWI76_RS00815 0.56 +2.8 167,640 + BWI76_RS00815 0.68 -1.0 167,735 + BWI76_RS00815 0.76 +1.5 167,743 - BWI76_RS00815 0.77 +0.1 167,896 - -1.0 168,079 + -0.6 168,079 + +0.4 168,096 + -2.3 168,189 + BWI76_RS00820 0.21 -2.2 168,297 + BWI76_RS00820 0.37 -0.5 168,305 - BWI76_RS00820 0.38 +0.3 168,384 - BWI76_RS00820 0.50 -1.1 168,395 + BWI76_RS00820 0.52 -0.1 168,481 + BWI76_RS00820 0.65 -0.7 168,590 - BWI76_RS00820 0.81 -1.1 168,742 + +0.2 168,848 + -1.1 168,978 - +1.8
Or see this region's nucleotide sequence