Experiment: Paraquat dichloride 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00700 and BWI76_RS00705 are separated by 291 nucleotides BWI76_RS00705 and BWI76_RS00710 are separated by 71 nucleotides BWI76_RS00710 and BWI76_RS00715 are separated by 91 nucleotides
BWI76_RS00700: BWI76_RS00700 - rhamnose/proton symporter RhaT, at 142,745 to 143,779
_RS00700
BWI76_RS00705: BWI76_RS00705 - superoxide dismutase, at 144,071 to 144,691
_RS00705
BWI76_RS00710: BWI76_RS00710 - 6-N-hydroxylaminopurine resistance protein, at 144,763 to 145,437
_RS00710
BWI76_RS00715: BWI76_RS00715 - two-component sensor histidine kinase, at 145,529 to 146,902
_RS00715
Position (kb)
144
145 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 143.140 kb on - strand, within BWI76_RS00700 at 143.145 kb on + strand, within BWI76_RS00700 at 143.153 kb on - strand, within BWI76_RS00700 at 143.155 kb on + strand, within BWI76_RS00700 at 143.163 kb on - strand, within BWI76_RS00700 at 143.163 kb on - strand, within BWI76_RS00700 at 143.243 kb on - strand, within BWI76_RS00700 at 143.255 kb on - strand, within BWI76_RS00700 at 143.305 kb on + strand, within BWI76_RS00700 at 143.313 kb on - strand, within BWI76_RS00700 at 143.324 kb on + strand, within BWI76_RS00700 at 143.332 kb on - strand, within BWI76_RS00700 at 143.390 kb on - strand, within BWI76_RS00700 at 143.616 kb on - strand, within BWI76_RS00700 at 143.673 kb on - strand, within BWI76_RS00700 at 143.714 kb on + strand at 143.724 kb on + strand at 143.724 kb on + strand at 143.732 kb on - strand at 143.732 kb on - strand at 143.732 kb on - strand at 143.785 kb on - strand at 143.823 kb on + strand at 143.866 kb on - strand at 143.866 kb on - strand at 143.866 kb on - strand at 143.880 kb on + strand at 143.948 kb on + strand at 144.031 kb on + strand at 144.704 kb on - strand at 144.802 kb on - strand at 145.079 kb on + strand, within BWI76_RS00710 at 145.087 kb on - strand, within BWI76_RS00710 at 145.478 kb on + strand at 145.560 kb on + strand at 145.686 kb on - strand, within BWI76_RS00715
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.1 mg/ml remove 143,140 - BWI76_RS00700 0.38 -0.3 143,145 + BWI76_RS00700 0.39 +0.3 143,153 - BWI76_RS00700 0.39 +1.0 143,155 + BWI76_RS00700 0.40 -0.2 143,163 - BWI76_RS00700 0.40 +0.3 143,163 - BWI76_RS00700 0.40 +0.6 143,243 - BWI76_RS00700 0.48 -0.7 143,255 - BWI76_RS00700 0.49 +0.1 143,305 + BWI76_RS00700 0.54 +0.1 143,313 - BWI76_RS00700 0.55 -1.8 143,324 + BWI76_RS00700 0.56 +1.2 143,332 - BWI76_RS00700 0.57 +0.1 143,390 - BWI76_RS00700 0.62 +0.0 143,616 - BWI76_RS00700 0.84 +0.6 143,673 - BWI76_RS00700 0.90 -0.0 143,714 + +0.5 143,724 + -0.9 143,724 + -0.1 143,732 - +0.5 143,732 - +1.0 143,732 - -0.4 143,785 - +0.9 143,823 + -0.3 143,866 - -0.0 143,866 - -0.5 143,866 - +0.3 143,880 + -1.0 143,948 + +0.4 144,031 + -3.1 144,704 - -1.8 144,802 - -0.9 145,079 + BWI76_RS00710 0.47 -0.9 145,087 - BWI76_RS00710 0.48 +1.3 145,478 + +1.0 145,560 + -1.1 145,686 - BWI76_RS00715 0.11 -1.0
Or see this region's nucleotide sequence