Experiment: Varel_Bryant medium with 8-hydroxy-nitroquinoline 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0693 and BT0694 are separated by 40 nucleotides BT0694 and BT0695 are separated by 12 nucleotides BT0695 and BT0696 are separated by 137 nucleotides
BT0693: BT0693 - hypothetical protein (NCBI ptt file), at 861,424 to 863,805
BT0693
BT0694: BT0694 - ABC transporter, ATP-binding protein (NCBI ptt file), at 863,846 to 864,520
BT0694
BT0695: BT0695 - ABC transporter, permease protein (NCBI ptt file), at 864,533 to 866,848
BT0695
BT0696: BT0696 - putative membrane protein (NCBI ptt file), at 866,986 to 868,356
BT0696
Position (kb) 864
865
866
867 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 863.597 kb on + strand at 863.639 kb on - strand at 863.650 kb on - strand at 864.551 kb on - strand at 864.629 kb on - strand at 864.665 kb on + strand at 864.867 kb on + strand, within BT0695 at 864.873 kb on - strand, within BT0695 at 864.905 kb on - strand, within BT0695 at 864.905 kb on - strand, within BT0695 at 864.905 kb on - strand, within BT0695 at 864.908 kb on + strand, within BT0695 at 864.952 kb on - strand, within BT0695 at 864.970 kb on + strand, within BT0695 at 864.970 kb on - strand, within BT0695 at 864.971 kb on - strand, within BT0695 at 865.093 kb on - strand, within BT0695 at 865.115 kb on - strand, within BT0695 at 865.222 kb on + strand, within BT0695 at 865.379 kb on + strand, within BT0695 at 865.380 kb on - strand, within BT0695 at 865.425 kb on - strand, within BT0695 at 865.425 kb on - strand, within BT0695 at 865.425 kb on - strand, within BT0695 at 865.425 kb on - strand, within BT0695 at 865.434 kb on + strand, within BT0695 at 865.438 kb on + strand, within BT0695 at 865.438 kb on + strand, within BT0695 at 865.723 kb on + strand, within BT0695 at 865.966 kb on + strand, within BT0695 at 866.001 kb on + strand, within BT0695 at 866.072 kb on + strand, within BT0695 at 866.072 kb on + strand, within BT0695 at 866.149 kb on - strand, within BT0695 at 866.287 kb on + strand, within BT0695 at 866.288 kb on - strand, within BT0695 at 866.311 kb on + strand, within BT0695 at 866.311 kb on + strand, within BT0695 at 866.458 kb on - strand, within BT0695 at 866.511 kb on + strand, within BT0695 at 866.636 kb on + strand at 866.835 kb on + strand at 866.865 kb on + strand at 866.900 kb on - strand at 866.919 kb on - strand at 866.956 kb on + strand at 866.956 kb on + strand at 866.957 kb on - strand at 866.958 kb on + strand at 867.134 kb on - strand, within BT0696 at 867.207 kb on + strand, within BT0696 at 867.223 kb on - strand, within BT0696 at 867.372 kb on + strand, within BT0696 at 867.484 kb on + strand, within BT0696 at 867.498 kb on - strand, within BT0696 at 867.568 kb on - strand, within BT0696 at 867.694 kb on - strand, within BT0696 at 867.799 kb on - strand, within BT0696 at 867.805 kb on - strand, within BT0696
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant medium with 8-hydroxy-nitroquinoline 0.01 mM remove 863,597 + -0.6 863,639 - -1.4 863,650 - +0.4 864,551 - +1.0 864,629 - +0.5 864,665 + -0.4 864,867 + BT0695 0.14 -2.5 864,873 - BT0695 0.15 +1.0 864,905 - BT0695 0.16 -1.8 864,905 - BT0695 0.16 +1.0 864,905 - BT0695 0.16 +1.0 864,908 + BT0695 0.16 -1.0 864,952 - BT0695 0.18 -1.3 864,970 + BT0695 0.19 -1.4 864,970 - BT0695 0.19 +2.0 864,971 - BT0695 0.19 -1.4 865,093 - BT0695 0.24 -0.0 865,115 - BT0695 0.25 -0.6 865,222 + BT0695 0.30 -0.6 865,379 + BT0695 0.37 +2.0 865,380 - BT0695 0.37 -0.0 865,425 - BT0695 0.39 +1.0 865,425 - BT0695 0.39 -0.8 865,425 - BT0695 0.39 -1.4 865,425 - BT0695 0.39 +1.0 865,434 + BT0695 0.39 -0.6 865,438 + BT0695 0.39 -1.6 865,438 + BT0695 0.39 -3.4 865,723 + BT0695 0.51 -0.0 865,966 + BT0695 0.62 -1.6 866,001 + BT0695 0.63 -1.5 866,072 + BT0695 0.66 -2.2 866,072 + BT0695 0.66 -0.6 866,149 - BT0695 0.70 +0.5 866,287 + BT0695 0.76 +1.0 866,288 - BT0695 0.76 -1.0 866,311 + BT0695 0.77 -0.8 866,311 + BT0695 0.77 -1.0 866,458 - BT0695 0.83 -1.5 866,511 + BT0695 0.85 -1.1 866,636 + -0.5 866,835 + -0.8 866,865 + -1.1 866,900 - -0.0 866,919 - -0.3 866,956 + -1.0 866,956 + -2.4 866,957 - +1.0 866,958 + -0.3 867,134 - BT0696 0.11 +1.0 867,207 + BT0696 0.16 +1.0 867,223 - BT0696 0.17 -0.0 867,372 + BT0696 0.28 +2.0 867,484 + BT0696 0.36 -2.2 867,498 - BT0696 0.37 -1.4 867,568 - BT0696 0.42 -2.2 867,694 - BT0696 0.52 +2.0 867,799 - BT0696 0.59 +1.3 867,805 - BT0696 0.60 -0.0
Or see this region's nucleotide sequence