Experiment: bismuth(III) chloride 0.000025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6063 and Pf6N2E2_6064 are separated by 42 nucleotides Pf6N2E2_6064 and Pf6N2E2_6065 are separated by 336 nucleotides
Pf6N2E2_6063 - 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79), at 6,883,092 to 6,885,683
_6063
Pf6N2E2_6064 - 2-methylaconitate isomerase, at 6,885,726 to 6,886,919
_6064
Pf6N2E2_6065 - ABC transporter in pyoverdin gene cluster, periplasmic component, at 6,887,256 to 6,888,149
_6065
Position (kb)
6885
6886
6887 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6884.832 kb on + strand, within Pf6N2E2_6063 at 6884.832 kb on + strand, within Pf6N2E2_6063 at 6884.832 kb on + strand, within Pf6N2E2_6063 at 6884.833 kb on - strand, within Pf6N2E2_6063 at 6884.833 kb on - strand, within Pf6N2E2_6063 at 6884.833 kb on - strand, within Pf6N2E2_6063 at 6884.833 kb on - strand, within Pf6N2E2_6063 at 6884.910 kb on + strand, within Pf6N2E2_6063 at 6884.911 kb on - strand, within Pf6N2E2_6063 at 6884.911 kb on - strand, within Pf6N2E2_6063 at 6884.911 kb on - strand, within Pf6N2E2_6063 at 6884.911 kb on - strand, within Pf6N2E2_6063 at 6885.060 kb on + strand, within Pf6N2E2_6063 at 6885.060 kb on + strand, within Pf6N2E2_6063 at 6885.060 kb on + strand, within Pf6N2E2_6063 at 6885.268 kb on - strand, within Pf6N2E2_6063 at 6885.268 kb on - strand, within Pf6N2E2_6063 at 6885.268 kb on - strand, within Pf6N2E2_6063 at 6885.268 kb on - strand, within Pf6N2E2_6063 at 6885.268 kb on - strand, within Pf6N2E2_6063 at 6885.495 kb on + strand at 6885.618 kb on + strand at 6885.618 kb on + strand at 6885.619 kb on - strand at 6885.619 kb on - strand at 6885.619 kb on - strand at 6885.681 kb on + strand at 6885.682 kb on - strand at 6885.759 kb on - strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.762 kb on + strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.763 kb on - strand at 6885.764 kb on + strand at 6885.765 kb on - strand at 6885.765 kb on - strand at 6885.765 kb on - strand at 6885.885 kb on + strand, within Pf6N2E2_6064 at 6885.982 kb on - strand, within Pf6N2E2_6064 at 6885.982 kb on - strand, within Pf6N2E2_6064 at 6886.126 kb on + strand, within Pf6N2E2_6064 at 6886.587 kb on + strand, within Pf6N2E2_6064 at 6886.587 kb on + strand, within Pf6N2E2_6064 at 6886.588 kb on - strand, within Pf6N2E2_6064 at 6886.588 kb on - strand, within Pf6N2E2_6064 at 6886.588 kb on - strand, within Pf6N2E2_6064 at 6886.588 kb on - strand, within Pf6N2E2_6064 at 6886.633 kb on + strand, within Pf6N2E2_6064 at 6886.633 kb on + strand, within Pf6N2E2_6064 at 6886.634 kb on - strand, within Pf6N2E2_6064 at 6886.634 kb on - strand, within Pf6N2E2_6064 at 6886.634 kb on - strand, within Pf6N2E2_6064 at 6886.634 kb on - strand, within Pf6N2E2_6064 at 6887.105 kb on - strand at 6887.199 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction bismuth(III) chloride 0.000025 M remove 6,884,832 + Pf6N2E2_6063 0.67 +1.0 6,884,832 + Pf6N2E2_6063 0.67 -0.3 6,884,832 + Pf6N2E2_6063 0.67 -1.8 6,884,833 - Pf6N2E2_6063 0.67 +0.3 6,884,833 - Pf6N2E2_6063 0.67 +0.0 6,884,833 - Pf6N2E2_6063 0.67 +0.3 6,884,833 - Pf6N2E2_6063 0.67 -0.3 6,884,910 + Pf6N2E2_6063 0.70 -0.1 6,884,911 - Pf6N2E2_6063 0.70 -2.4 6,884,911 - Pf6N2E2_6063 0.70 -1.3 6,884,911 - Pf6N2E2_6063 0.70 -0.6 6,884,911 - Pf6N2E2_6063 0.70 +0.6 6,885,060 + Pf6N2E2_6063 0.76 +0.2 6,885,060 + Pf6N2E2_6063 0.76 +0.3 6,885,060 + Pf6N2E2_6063 0.76 -1.1 6,885,268 - Pf6N2E2_6063 0.84 -0.1 6,885,268 - Pf6N2E2_6063 0.84 +1.2 6,885,268 - Pf6N2E2_6063 0.84 -0.2 6,885,268 - Pf6N2E2_6063 0.84 +0.4 6,885,268 - Pf6N2E2_6063 0.84 -0.4 6,885,495 + -1.2 6,885,618 + +0.1 6,885,618 + +0.7 6,885,619 - +0.7 6,885,619 - -1.2 6,885,619 - +0.0 6,885,681 + +1.7 6,885,682 - -2.7 6,885,759 - +0.2 6,885,762 + -0.9 6,885,762 + +2.5 6,885,762 + +0.1 6,885,762 + -0.6 6,885,762 + -0.0 6,885,762 + +0.3 6,885,762 + +0.2 6,885,762 + +0.2 6,885,763 - -0.7 6,885,763 - -1.3 6,885,763 - +0.2 6,885,763 - +0.2 6,885,763 - -1.1 6,885,763 - +0.0 6,885,763 - -0.2 6,885,763 - +0.2 6,885,763 - -0.8 6,885,763 - +0.1 6,885,763 - +1.2 6,885,764 + -0.9 6,885,765 - -0.4 6,885,765 - +0.5 6,885,765 - +0.8 6,885,885 + Pf6N2E2_6064 0.13 -0.6 6,885,982 - Pf6N2E2_6064 0.21 -2.8 6,885,982 - Pf6N2E2_6064 0.21 +0.1 6,886,126 + Pf6N2E2_6064 0.34 -0.5 6,886,587 + Pf6N2E2_6064 0.72 -0.5 6,886,587 + Pf6N2E2_6064 0.72 -1.6 6,886,588 - Pf6N2E2_6064 0.72 -1.1 6,886,588 - Pf6N2E2_6064 0.72 +1.2 6,886,588 - Pf6N2E2_6064 0.72 -1.4 6,886,588 - Pf6N2E2_6064 0.72 +1.4 6,886,633 + Pf6N2E2_6064 0.76 -1.4 6,886,633 + Pf6N2E2_6064 0.76 -0.3 6,886,634 - Pf6N2E2_6064 0.76 +0.5 6,886,634 - Pf6N2E2_6064 0.76 -0.3 6,886,634 - Pf6N2E2_6064 0.76 +0.1 6,886,634 - Pf6N2E2_6064 0.76 +0.1 6,887,105 - +0.1 6,887,199 + -0.4
Or see this region's nucleotide sequence