Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4661

Experiment: bismuth(III) chloride 0.000025 M

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_4660 and Pf6N2E2_4661 are separated by 409 nucleotidesPf6N2E2_4661 and Pf6N2E2_4662 are separated by 186 nucleotides Pf6N2E2_4660 - Fructose-bisphosphate aldolase class II (EC 4.1.2.13), at 5,389,621 to 5,390,685 _4660 Pf6N2E2_4661 - KluA regulatory protein, at 5,391,095 to 5,391,373 _4661 Pf6N2E2_4662 - hypothetical protein, at 5,391,560 to 5,391,880 _4662 Position (kb) 5391 5392Strain fitness (log2 ratio) -2 -1 0 1 2at 5390.683 kb on + strandat 5390.683 kb on + strandat 5390.683 kb on + strandat 5390.684 kb on - strandat 5390.746 kb on + strandat 5390.746 kb on + strandat 5390.746 kb on + strandat 5390.747 kb on - strandat 5390.747 kb on - strandat 5390.747 kb on - strandat 5390.747 kb on - strandat 5390.747 kb on - strandat 5390.747 kb on - strandat 5390.764 kb on - strandat 5390.764 kb on - strandat 5390.772 kb on + strandat 5390.783 kb on - strandat 5390.896 kb on + strandat 5390.897 kb on - strandat 5390.897 kb on - strandat 5390.897 kb on - strandat 5390.907 kb on - strandat 5390.922 kb on + strandat 5390.922 kb on + strandat 5390.923 kb on - strandat 5390.923 kb on - strandat 5390.923 kb on - strandat 5390.923 kb on - strandat 5390.923 kb on - strandat 5390.961 kb on + strandat 5390.961 kb on + strandat 5390.961 kb on + strandat 5390.962 kb on - strandat 5390.974 kb on + strandat 5390.974 kb on + strandat 5390.974 kb on + strandat 5390.975 kb on - strandat 5390.975 kb on - strandat 5390.975 kb on - strandat 5390.975 kb on - strandat 5390.993 kb on + strandat 5390.993 kb on + strandat 5390.994 kb on - strandat 5390.994 kb on - strandat 5390.994 kb on - strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.034 kb on + strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.035 kb on - strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.038 kb on + strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.039 kb on - strandat 5391.040 kb on + strandat 5391.040 kb on + strandat 5391.041 kb on - strandat 5391.041 kb on - strandat 5391.041 kb on - strandat 5391.041 kb on - strandat 5391.041 kb on - strandat 5391.041 kb on - strandat 5391.042 kb on + strandat 5391.042 kb on + strandat 5391.042 kb on + strandat 5391.042 kb on + strandat 5391.042 kb on + strandat 5391.043 kb on - strandat 5391.051 kb on + strandat 5391.051 kb on + strandat 5391.051 kb on + strandat 5391.052 kb on - strandat 5391.052 kb on - strandat 5391.088 kb on + strandat 5391.089 kb on - strandat 5391.089 kb on - strandat 5391.089 kb on - strandat 5391.089 kb on - strandat 5391.096 kb on + strandat 5391.097 kb on - strandat 5391.097 kb on - strandat 5391.192 kb on + strand, within Pf6N2E2_4661at 5391.203 kb on + strand, within Pf6N2E2_4661at 5391.212 kb on + strand, within Pf6N2E2_4661at 5391.291 kb on + strand, within Pf6N2E2_4661at 5391.291 kb on + strand, within Pf6N2E2_4661at 5391.291 kb on + strand, within Pf6N2E2_4661at 5391.292 kb on - strand, within Pf6N2E2_4661at 5391.292 kb on - strand, within Pf6N2E2_4661at 5391.292 kb on - strand, within Pf6N2E2_4661at 5391.367 kb on + strandat 5391.367 kb on + strandat 5391.374 kb on - strandat 5391.394 kb on + strandat 5391.395 kb on - strandat 5391.395 kb on - strandat 5391.401 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.424 kb on + strandat 5391.425 kb on - strandat 5391.425 kb on - strandat 5391.425 kb on - strandat 5391.459 kb on - strandat 5391.469 kb on + strandat 5391.562 kb on - strandat 5391.702 kb on + strand, within Pf6N2E2_4662at 5391.767 kb on - strand, within Pf6N2E2_4662at 5391.844 kb on + strand, within Pf6N2E2_4662at 5391.844 kb on + strand, within Pf6N2E2_4662at 5391.844 kb on + strand, within Pf6N2E2_4662at 5391.844 kb on + strand, within Pf6N2E2_4662at 5391.844 kb on + strand, within Pf6N2E2_4662at 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.880 kb on + strandat 5391.881 kb on - strandat 5391.881 kb on - strandat 5391.881 kb on - strandat 5391.881 kb on - strandat 5391.881 kb on - strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.938 kb on + strandat 5391.939 kb on - strandat 5391.939 kb on - strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.940 kb on + strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5391.941 kb on - strandat 5392.126 kb on - strandat 5392.126 kb on - strandat 5392.274 kb on + strandat 5392.274 kb on + strandat 5392.275 kb on - strandat 5392.275 kb on - strandat 5392.275 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction bismuth(III) chloride 0.000025 M
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5,390,683 + -0.1
5,390,683 + +0.1
5,390,683 + +0.1
5,390,684 - +0.8
5,390,746 + +0.3
5,390,746 + +0.9
5,390,746 + -0.1
5,390,747 - -0.9
5,390,747 - +0.4
5,390,747 - +0.5
5,390,747 - -0.4
5,390,747 - +0.5
5,390,747 - -0.7
5,390,764 - -1.0
5,390,764 - +0.2
5,390,772 + -0.1
5,390,783 - +0.3
5,390,896 + +0.5
5,390,897 - +0.3
5,390,897 - -0.2
5,390,897 - -1.1
5,390,907 - +1.0
5,390,922 + +0.9
5,390,922 + +0.1
5,390,923 - +0.3
5,390,923 - -0.8
5,390,923 - -0.1
5,390,923 - -0.3
5,390,923 - +0.5
5,390,961 + -1.5
5,390,961 + +0.1
5,390,961 + +0.2
5,390,962 - +0.6
5,390,974 + -0.0
5,390,974 + +0.6
5,390,974 + -0.6
5,390,975 - -0.4
5,390,975 - +0.1
5,390,975 - -0.4
5,390,975 - -2.1
5,390,993 + +0.4
5,390,993 + +0.9
5,390,994 - -0.8
5,390,994 - -1.5
5,390,994 - +1.7
5,391,034 + -0.1
5,391,034 + +0.3
5,391,034 + +1.3
5,391,034 + -0.1
5,391,034 + -0.1
5,391,034 + +0.9
5,391,034 + -0.5
5,391,034 + -0.7
5,391,034 + +0.6
5,391,034 + +1.0
5,391,034 + -0.1
5,391,034 + -0.5
5,391,034 + +0.1
5,391,034 + -0.2
5,391,034 + -0.2
5,391,035 - -0.2
5,391,035 - +0.3
5,391,035 - -0.2
5,391,035 - +0.2
5,391,035 - -0.2
5,391,035 - +0.4
5,391,035 - +0.2
5,391,035 - -0.2
5,391,035 - +1.0
5,391,035 - -0.5
5,391,035 - +0.1
5,391,035 - +0.2
5,391,035 - -2.0
5,391,035 - +0.1
5,391,035 - +0.8
5,391,038 + -1.4
5,391,038 + -1.8
5,391,038 + +0.3
5,391,038 + +0.2
5,391,038 + -0.4
5,391,038 + -0.2
5,391,038 + +0.6
5,391,038 + -0.2
5,391,038 + +0.2
5,391,038 + +0.1
5,391,038 + -0.3
5,391,038 + +0.4
5,391,038 + +0.3
5,391,038 + -0.0
5,391,038 + +0.6
5,391,039 - +0.5
5,391,039 - -0.2
5,391,039 - -0.2
5,391,039 - +2.0
5,391,039 - +0.1
5,391,039 - +0.3
5,391,039 - +0.1
5,391,039 - -1.4
5,391,039 - +0.1
5,391,039 - +0.0
5,391,039 - -1.1
5,391,039 - +1.0
5,391,039 - -0.2
5,391,039 - +0.6
5,391,039 - -0.4
5,391,039 - +0.3
5,391,039 - +0.2
5,391,039 - +0.5
5,391,039 - +1.5
5,391,039 - -0.5
5,391,039 - -0.8
5,391,039 - -0.6
5,391,039 - +0.7
5,391,039 - -1.6
5,391,039 - +0.6
5,391,039 - -0.2
5,391,040 + +0.4
5,391,040 + -0.1
5,391,041 - -1.9
5,391,041 - +0.1
5,391,041 - +0.4
5,391,041 - -0.5
5,391,041 - +0.0
5,391,041 - +0.8
5,391,042 + +0.8
5,391,042 + -0.2
5,391,042 + +1.2
5,391,042 + -0.5
5,391,042 + +0.7
5,391,043 - +0.0
5,391,051 + +0.4
5,391,051 + +0.2
5,391,051 + -0.1
5,391,052 - -1.2
5,391,052 - -1.1
5,391,088 + +0.0
5,391,089 - +1.0
5,391,089 - -0.4
5,391,089 - +0.0
5,391,089 - +0.5
5,391,096 + +0.7
5,391,097 - -0.2
5,391,097 - +0.1
5,391,192 + Pf6N2E2_4661 0.35 -0.3
5,391,203 + Pf6N2E2_4661 0.39 -0.3
5,391,212 + Pf6N2E2_4661 0.42 +0.1
5,391,291 + Pf6N2E2_4661 0.70 -0.1
5,391,291 + Pf6N2E2_4661 0.70 +0.0
5,391,291 + Pf6N2E2_4661 0.70 -0.2
5,391,292 - Pf6N2E2_4661 0.71 -0.3
5,391,292 - Pf6N2E2_4661 0.71 -2.1
5,391,292 - Pf6N2E2_4661 0.71 -2.1
5,391,367 + -1.8
5,391,367 + +1.4
5,391,374 - -0.9
5,391,394 + -0.1
5,391,395 - -0.2
5,391,395 - +0.8
5,391,401 + +0.7
5,391,424 + -0.2
5,391,424 + +0.1
5,391,424 + -0.1
5,391,424 + +0.1
5,391,424 + -0.3
5,391,424 + +0.1
5,391,424 + +0.1
5,391,425 - -0.2
5,391,425 - +0.3
5,391,425 - -2.0
5,391,459 - +0.4
5,391,469 + -1.2
5,391,562 - +0.1
5,391,702 + Pf6N2E2_4662 0.44 +0.3
5,391,767 - Pf6N2E2_4662 0.64 +0.2
5,391,844 + Pf6N2E2_4662 0.88 +0.5
5,391,844 + Pf6N2E2_4662 0.88 -0.2
5,391,844 + Pf6N2E2_4662 0.88 +0.0
5,391,844 + Pf6N2E2_4662 0.88 +0.5
5,391,844 + Pf6N2E2_4662 0.88 +0.8
5,391,880 + -0.0
5,391,880 + -0.4
5,391,880 + -0.4
5,391,880 + +0.1
5,391,880 + -0.1
5,391,880 + +0.2
5,391,880 + +0.6
5,391,880 + -0.3
5,391,880 + -0.2
5,391,881 - -1.8
5,391,881 - +2.0
5,391,881 - +0.6
5,391,881 - +0.5
5,391,881 - +2.0
5,391,938 + +0.1
5,391,938 + +0.0
5,391,938 + +0.3
5,391,938 + -1.2
5,391,938 + +0.4
5,391,938 + +0.6
5,391,938 + -0.4
5,391,938 + -0.6
5,391,938 + +0.2
5,391,939 - +0.2
5,391,939 - -0.1
5,391,940 + -1.0
5,391,940 + +0.4
5,391,940 + -0.2
5,391,940 + -0.1
5,391,940 + -1.2
5,391,940 + +0.4
5,391,940 + -0.1
5,391,940 + -0.2
5,391,940 + -0.0
5,391,941 - +0.3
5,391,941 - -0.6
5,391,941 - +0.5
5,391,941 - +0.2
5,391,941 - +1.4
5,391,941 - -0.8
5,391,941 - +1.1
5,391,941 - +0.4
5,391,941 - +0.7
5,392,126 - +0.1
5,392,126 - -0.6
5,392,274 + +0.4
5,392,274 + +0.3
5,392,275 - +0.9
5,392,275 - +0.1
5,392,275 - +0.3

Or see this region's nucleotide sequence