Experiment: bismuth(III) chloride 0.000025 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2629 and Pf6N2E2_2630 are separated by 411 nucleotides Pf6N2E2_2630 and Pf6N2E2_2631 are separated by 54 nucleotides Pf6N2E2_2631 and Pf6N2E2_2632 overlap by 1 nucleotides
Pf6N2E2_2629 - Phenylalanine hydroxylase transcriptional activator PhhR, at 3,090,762 to 3,092,324
_2629
Pf6N2E2_2630 - Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data) , at 3,092,736 to 3,093,521
_2630
Pf6N2E2_2631 - Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96), at 3,093,576 to 3,093,977
_2631
Pf6N2E2_2632 - tyrosine aminotransferase (EC 2.6.1.57) (from data) , at 3,093,977 to 3,095,170
_2632
Position (kb)
3092
3093
3094 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.744 kb on + strand, within Pf6N2E2_2629 at 3091.745 kb on - strand, within Pf6N2E2_2629 at 3092.200 kb on + strand at 3092.200 kb on + strand at 3092.200 kb on + strand at 3092.200 kb on + strand at 3092.201 kb on - strand at 3092.201 kb on - strand at 3092.201 kb on - strand at 3092.249 kb on + strand at 3092.254 kb on + strand at 3092.522 kb on - strand at 3092.583 kb on + strand at 3092.584 kb on - strand at 3092.584 kb on - strand at 3092.613 kb on + strand at 3092.613 kb on + strand at 3092.613 kb on + strand at 3092.613 kb on + strand at 3092.613 kb on + strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.614 kb on - strand at 3092.666 kb on + strand at 3092.672 kb on + strand at 3092.689 kb on + strand at 3092.689 kb on + strand at 3092.690 kb on - strand at 3092.751 kb on + strand at 3092.751 kb on + strand at 3092.752 kb on - strand at 3092.790 kb on + strand at 3092.791 kb on - strand at 3092.871 kb on + strand, within Pf6N2E2_2630 at 3092.872 kb on - strand, within Pf6N2E2_2630 at 3093.073 kb on - strand, within Pf6N2E2_2630 at 3093.073 kb on - strand, within Pf6N2E2_2630 at 3093.201 kb on + strand, within Pf6N2E2_2630 at 3093.216 kb on + strand, within Pf6N2E2_2630 at 3093.216 kb on + strand, within Pf6N2E2_2630 at 3093.270 kb on + strand, within Pf6N2E2_2630 at 3093.270 kb on + strand, within Pf6N2E2_2630 at 3093.309 kb on + strand, within Pf6N2E2_2630 at 3093.309 kb on + strand, within Pf6N2E2_2630 at 3093.310 kb on - strand, within Pf6N2E2_2630 at 3093.310 kb on - strand, within Pf6N2E2_2630 at 3093.400 kb on - strand, within Pf6N2E2_2630 at 3093.534 kb on - strand at 3093.534 kb on - strand at 3093.534 kb on - strand at 3093.600 kb on + strand at 3093.600 kb on + strand at 3093.601 kb on - strand at 3093.601 kb on - strand at 3093.975 kb on + strand at 3093.975 kb on + strand at 3093.975 kb on + strand at 3093.976 kb on - strand at 3093.976 kb on - strand at 3093.976 kb on - strand at 3093.976 kb on - strand at 3093.976 kb on - strand at 3093.976 kb on - strand at 3094.172 kb on + strand, within Pf6N2E2_2632 at 3094.172 kb on + strand, within Pf6N2E2_2632 at 3094.172 kb on + strand, within Pf6N2E2_2632 at 3094.224 kb on + strand, within Pf6N2E2_2632 at 3094.225 kb on - strand, within Pf6N2E2_2632 at 3094.225 kb on - strand, within Pf6N2E2_2632 at 3094.419 kb on - strand, within Pf6N2E2_2632 at 3094.424 kb on + strand, within Pf6N2E2_2632 at 3094.424 kb on + strand, within Pf6N2E2_2632 at 3094.425 kb on - strand, within Pf6N2E2_2632 at 3094.425 kb on - strand, within Pf6N2E2_2632
Per-strain Table
Position Strand Gene LocusTag Fraction bismuth(III) chloride 0.000025 M remove 3,091,744 + Pf6N2E2_2629 0.63 +0.6 3,091,744 + Pf6N2E2_2629 0.63 -1.1 3,091,744 + Pf6N2E2_2629 0.63 -0.5 3,091,744 + Pf6N2E2_2629 0.63 +0.5 3,091,744 + Pf6N2E2_2629 0.63 +0.9 3,091,744 + Pf6N2E2_2629 0.63 +0.2 3,091,744 + Pf6N2E2_2629 0.63 +1.0 3,091,744 + Pf6N2E2_2629 0.63 +0.4 3,091,744 + Pf6N2E2_2629 0.63 +0.1 3,091,744 + Pf6N2E2_2629 0.63 -0.9 3,091,745 - Pf6N2E2_2629 0.63 +0.7 3,092,200 + -0.3 3,092,200 + -0.4 3,092,200 + +0.0 3,092,200 + -0.2 3,092,201 - +0.1 3,092,201 - +1.1 3,092,201 - -0.7 3,092,249 + +1.3 3,092,254 + +0.7 3,092,522 - +0.9 3,092,583 + -0.7 3,092,584 - -0.5 3,092,584 - -0.1 3,092,613 + -1.0 3,092,613 + +0.7 3,092,613 + +0.8 3,092,613 + -1.6 3,092,613 + +0.0 3,092,614 - +0.4 3,092,614 - -0.3 3,092,614 - -1.3 3,092,614 - -1.2 3,092,614 - +0.7 3,092,614 - -0.3 3,092,614 - -1.0 3,092,614 - -0.8 3,092,614 - -1.4 3,092,614 - +0.1 3,092,614 - -2.9 3,092,666 + -0.0 3,092,672 + +1.0 3,092,689 + +0.0 3,092,689 + -1.0 3,092,690 - -0.2 3,092,751 + +0.0 3,092,751 + +0.0 3,092,752 - -0.5 3,092,790 + -1.0 3,092,791 - +0.3 3,092,871 + Pf6N2E2_2630 0.17 -1.0 3,092,872 - Pf6N2E2_2630 0.17 -1.5 3,093,073 - Pf6N2E2_2630 0.43 -2.1 3,093,073 - Pf6N2E2_2630 0.43 -1.2 3,093,201 + Pf6N2E2_2630 0.59 -0.5 3,093,216 + Pf6N2E2_2630 0.61 -1.2 3,093,216 + Pf6N2E2_2630 0.61 -0.6 3,093,270 + Pf6N2E2_2630 0.68 -0.8 3,093,270 + Pf6N2E2_2630 0.68 +0.9 3,093,309 + Pf6N2E2_2630 0.73 +0.0 3,093,309 + Pf6N2E2_2630 0.73 -0.3 3,093,310 - Pf6N2E2_2630 0.73 +1.3 3,093,310 - Pf6N2E2_2630 0.73 -1.1 3,093,400 - Pf6N2E2_2630 0.84 -0.5 3,093,534 - +0.2 3,093,534 - -0.6 3,093,534 - +0.8 3,093,600 + +0.1 3,093,600 + +0.8 3,093,601 - -0.5 3,093,601 - -1.6 3,093,975 + -0.9 3,093,975 + -0.1 3,093,975 + +0.4 3,093,976 - -0.8 3,093,976 - -0.2 3,093,976 - +1.3 3,093,976 - -0.4 3,093,976 - +0.1 3,093,976 - -1.0 3,094,172 + Pf6N2E2_2632 0.16 +0.5 3,094,172 + Pf6N2E2_2632 0.16 +0.3 3,094,172 + Pf6N2E2_2632 0.16 -0.5 3,094,224 + Pf6N2E2_2632 0.21 -0.3 3,094,225 - Pf6N2E2_2632 0.21 +0.2 3,094,225 - Pf6N2E2_2632 0.21 -0.7 3,094,419 - Pf6N2E2_2632 0.37 +0.0 3,094,424 + Pf6N2E2_2632 0.37 -0.7 3,094,424 + Pf6N2E2_2632 0.37 -0.5 3,094,425 - Pf6N2E2_2632 0.38 -0.7 3,094,425 - Pf6N2E2_2632 0.38 +0.3
Or see this region's nucleotide sequence